Query= MSMg01no366_h23.b1 MSMg01no366_h23.b1 CHROMAT_FILE:
MSMg01no366_h23.b1 PHD_FILE: MSMg01no366_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:22 2005
(423 letters)
>mm_chr2_109433364_109434189
Length = 826
Score = 770 bits (398), Expect = 0.0
Identities = 418/426 (98%), Gaps = 4/426 (0%)
Strand = Plus / Plus
Query: 1 cagctagaagattggcttacaggcagctaggacaagggacttaaatcccacatccacagt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cagctagaagactggcttacaggcagctaggacaagggacttaaatcccacatccacagt 261
Query: 61 gacacacctactccaaaaaaaaaaaaaaaaaaccacacctcctagtagtaaatatacaaa 120
|||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 262 gacacacctactcc-aaaaaaaaaaaaacaacccacacctcctagtagtaaatatacaaa 320
Query: 121 tgatcataggggatatggtgaattttgtaactttatgaattcttgagtcttgtaagtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatcataggggatatggtgaattttgtaactttatgaattcttgagtcttgtaagtttc 380
Query: 181 aagaacttcctgcatcttatgaatattccctctccctcctggaggaaatatttaattcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaacttcctgcatcttatgaatattccctctccctcctggaggaaatatttaattcaa 440
Query: 241 aggaaatgacgacacaacacttcaccatttccttagcttttttttttt---cactccctt 297
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 aggaaatgacgacacaacacttcaccatttccttagcttttttttttttttcactccctt 500
Query: 298 tcctacaatgtttcttgagttttggaggaggtgttataaaagtctatttatccaataacc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcctacaatgtttcttgagttttggaggaggtgttataaaagtctatttatccaataacc 560
Query: 358 tcttggcctctggaagtgttcttttctacttatacaggatgcctttatttgaactcttta 417
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tcttggcctctggaagtgttcttttctacttatacagaatgcctttatttgaactcttta 620
Query: 418 cctgct 423
||||||
Sbjct: 621 cctgct 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 826
Length adjustment: 9
Effective length of query: 414
Effective length of database: 817
Effective search space: 338238
Effective search space used: 338238
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_h23.g1 MSMg01no366_h23.g1 CHROMAT_FILE:
MSMg01no366_h23.g1 PHD_FILE: MSMg01no366_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:22 2005
(278 letters)
>mm_chr2_109615787_109616463
Length = 677
Score = 524 bits (271), Expect = e-153
Identities = 274/275 (99%), Gaps = 1/275 (0%)
Strand = Plus / Minus
Query: 1 tgttttgaagggcaaaaaatgcaacaagaatgcctgtaactcaacttgagggtgagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgttttgaagggcaaaaaatgcaacaagaatgcctgtaactcaacttgagggtgagaacc 371
Query: 61 aagagatgactatatggccagtattagaagcaaagttttatgataatataacaattaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aagagatgactatatggccagtattagaagcaaagttttatgataatataacaattaagt 311
Query: 121 tttggaatgacattgagaaattacatcgacctacctttccaattccagatctttcactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttggaatgacattgagaaattacatcgacctacctttccaattccagatctttcactta 251
Query: 181 ctaaatttgacaatttaactaaatatcttagcatttttatatgttgtttccgtgtgtgtg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 250 ctaaatttgacaatttaactaaatatcttagca-ttttatatgttgtttccgtgtgtgtg 192
Query: 241 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 275
|||||||||||||||||||||||||||||||||||
Sbjct: 191 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 677
Length adjustment: 9
Effective length of query: 269
Effective length of database: 668
Effective search space: 179692
Effective search space used: 179692
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
