NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTAATAAGGGAAGCTTGTGGTTTCGTTTCAGATGCACTGTTGGGTAA
TCAGGTTGTAACAGTGTACTGTGGAAAGGCGTAATGAAGGAAGATTGGAA
CTTCCCTCTATCGACAATTTCAAATGTCAGATAAGCAGCTTTCTCCAGAT
CACAAATGAGGTACACACAGTCCAGCATGGAGACAAAAGGGCTGATGTCA
TTGATTCCAGATGGCTCTTCCATCGTGAGGACACATTAGAGCTGTCCTTC
CTCTGCTACATGTATTCAACAGAGAAGCAACTCAGAAGTTCTTTCCCAGG
AAGAATCCTTTTCTTCTGTAGTTGTTTAGTACTCCCAACACACACACACA
CACACACACACACACACACACACACACACACACACACTTCCAAACCTCCT
GCATTGTTGTTAACACCCAGGGATTCTCACATGCTGAACCTGCTTTGGAG
CTGTGTAGATGGAGCCCCAGCTCAAGTACAGGAACTTCCTCTAGGCTGGA
CTGCCAGCCTACACTTGTAGGCACTTAACTGGTCTCCATTGCCCTCCAGA
AAAGAGAAAAGGACCAGAAGGGTGGGGGAGGGGAAAAACCCCTGGAAAAA
AATTTTTCCGCTCTTTATAAAAGGGCTAAATCAACGCTTCGTCTTTTCCC
CTACAAACCTTGGTTCCCCCCCATTGTGTTTTTTTTATTGTTCTCCCCCG
TCCCACCTTCCTTTTTACTTTATTCCTCTTTTTGT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAGCCATCTTACTTCCAAACCAT
TGCCCCTTGACTGTCTTATTTATTTTATTTTATTTTATTTTATTTTATTT
TATTTTATTTTATTTTATTTTTAATTTAATTTTTACACTCCATATTTTAT
CCCCCCTCCATCCACCATCCAACTGCTCCATATCCCACACTTTCTCCCCA
CCTTACCCAGTCTCCATATGGATGCCCCTACCCCCACCCCACCTGACCTC
TAAACTCCCTTGGGCCTCCAGTCGCTTGAGGGTTAGGTACATCATCTGAA
TGAACACAGACCCAGCAGTCCTCTGCTGTATGTGTGTTGGGGGTGCTTGT
ATCAGCTGGTGTATGCTGTCTGTTTGATGGTCCAGTGTTTGAGAGATCTC
GGGGGTCTGGACTAATTGAGACTGCTGGTCTTCCTGCAGGTTCACCCTTC
TCCTCAGCTTCTTTTAGCCTTCCTTAATTCAACAACAGGGGTCAACTGCT
TCTGTCAATTGGGTGGGCACAAATATCTGGCCTTTGATGTCTTCTTAATG
ATCCCCCTGGTCCAAACCCACCTGTGTGGCCAACCCCCAAGGGTTCAAAA
CCGGACGATCCTTTTTTTTGGGCCCTTGGTGACTTTCCCAAAAAATTTCT
TTTGGTTGGGATCCCCGGAGGGTGGTTTTTTTCGTACAATGTATATTTAA
ATGGGTTAGGGTTTTGAACC

Query= MSMg01no367_d22.b1 MSMg01no367_d22.b1 CHROMAT_FILE:
MSMg01no367_d22.b1 PHD_FILE: MSMg01no367_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:20 2005
         (459 letters)



>mm_chr2_68079840_68080699
          Length = 860

 Score =  839 bits (434), Expect = 0.0
 Identities = 450/456 (98%), Gaps = 3/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaatt-aataagggaagcttgtggtttcgtttcagatgcactgttgggtaatcaggttgt 63
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattcaataagggaagcttgtggtttcgtttcagatgcactgttgggtaatcaggttgt 483

                                                                       
Query: 64  aacagtgtactgtggaaaggcgtaatgaaggaagattggaacttccctctatcgacaatt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aacagtgtactgtggaaaggcgtaatgaaggaagattggaacttccctctatcgacaatt 423

                                                                       
Query: 124 tcaaatgtcagataagcagctttctccagatcacaaatgaggtacacacagtccagcatg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaaatgtcagataagcagctttctccagatcacaaatgaggtacacacagtccagcatg 363

                                                                       
Query: 184 gagacaaaagggctgatgtcattgattccagatggctcttccatcgtgaggacacattag 243
           ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 gagacaaaaggactgatgtcattgattccagatggctcttccatcatgaggacacattag 303

                                                                       
Query: 244 agctgtccttcctctgctacatgtattcaacagagaagcaactcagaagttctttcccag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 302 agctgtccttcctctgctacatgtattcaacagagaagcaactcagaagttctttcccaa 243

                                                                       
Query: 304 gaagaatccttttcttctgtagttgtttagtactcccaacacacacacacacacacacac 363
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 242 gaagaatccttttcttctgtagttgtttagtactccca--acacacacacacacacacac 185

                                                                       
Query: 364 acacacacacacacacacacacacacacttccaaacctcctgcattgttgttaacaccca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 acacacacacacacacacacacacacacttccaaacctcctgcattgttgttaacaccca 125

                                               
Query: 424 gggattctcacatgctgaacctgctttggagctgtg 459
           ||||||||||||||||||||||||||||||||||||
Sbjct: 124 gggattctcacatgctgaacctgctttggagctgtg 89


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 860
Length adjustment: 10
Effective length of query: 449
Effective length of database: 850
Effective search space:   381650
Effective search space used:   381650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)