NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACCTATGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGAAAGGATGTGGAGAAAGAGGAACACTCCTCCATGGTTGATG
GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGTCTCAACCGGTAAGAAGGGCACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGGT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAAGG
GAGTACTACTCAGGTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGTAACACATTCCCAAAG
GAACTCCACAATATGTACTCACTGATAAGTGGATAAGCCCAAACTTATGA
TACCCCAGATATAAAATAAATTTGTTTAACCCTGGAACTCTAAAGAAAGA
AAAATGAAGGGTGGAACTATGCCCTTCCTTTTAATTGGGAAAAACACCCC
CGGTTGGGTTTTCTAAACAAATTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAGATCCTCAGCTTACTCAACGAGTGTTGTTACCCAGTGAGCCATC
TCTTCAGACTGCCTTGTCTTCTCCTCTCTCCCCATCTCTCTCTCTCTGTC
TTCCCTGAGATTCTGTGTTGGTTTGAAGAAATGGGGTCTTCTTATGTTGC
CCAGGATGGCCCTAAGTTGCTGGACTCAAATGATTCTTCTGTTTCAGACT
CTTAAATGGTAGCTAGAACAACAGGCATGTACCACCATGAAGGACTGAGA
ATTAATTCAACTTTATTAACTCTCATTGGACTATAATTGCTAGTAATACT
TATTACTAATTGAAAGAGCTTATGGTTGGGCTTAATGCATAATTCACATG
CAAAAATAAAAACTGTTACATAGAAGGAGATGGTTTGCAGAATCTTTTGA
ATCCACCATCTGCATTTACAAATCGAATACGTGAGCATCCACATATTGTG
CTACTACAAAGTGTAAAAGGGATGAGAGACTAGAGTAACTCATTTATTCA
TCTACCTGTTCGACGTGTTATCATTTGATACTCACTATTTGCCAGAAAAC
ATGTGTAAGACACTTGATGGAGGACAGAAAGCACAAGAAGTTTTGACTGA
GACTTTTGGAGAATAAATTACTCCATGGGACATTAACCTGTAGTTTAACT
CATAAAACCTTTAACCTGAGCTTCCCCCTCCAAGGAGGTTTGTTTTTTTT
CT

Query= MSMg01no367_f16.g1 MSMg01no367_f16.g1 CHROMAT_FILE:
MSMg01no367_f16.g1 PHD_FILE: MSMg01no367_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:29 2005
         (540 letters)



>mm_chr2_43463968_43464908
          Length = 941

 Score =  949 bits (491), Expect = 0.0
 Identities = 503/507 (99%), Gaps = 1/507 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  agtgagccatctcttcagactgccttgtcttctcctctctccccatctctctctctctgt 94
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 941 agtgagccatctcttcagactgcctggtcttctcctctctccccatctctctctctctgt 882

                                                                       
Query: 95  cttccctgagattctgtgttggtttgaagaaatggggtcttcttatgttgcccaggatgg 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 cttccctgagattctgtgttggtttgaagaaatggggtcttcttatgttgcccaggatgg 822

                                                                       
Query: 155 ccctaagttgctggactcaaatgattcttctgtttcagactcttaaatggtagctagaac 214
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 821 ccctaagttgctggactcaaatgattcttctgcttcagactcttaaatggtagctagaac 762

                                                                       
Query: 215 aacaggcatgtaccaccatgaaggactgagaattaattcaactttattaactctcattgg 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aacaggcatgtaccaccatgaaggactgagaattaattcaactttattaactctcattgg 702

                                                                       
Query: 275 actataattgctagtaatacttattactaattgaaagagcttatggttgggcttaatgca 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 actataattgctagtaatacttattactaattgaaagagcttatggttgggcttaatgca 642

                                                                       
Query: 335 taattcacatgcaaaaataaaaactgttacatagaaggagatggtttgcagaatc-tttt 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 641 taattcacatgcaaaaataaaaactgttacatagaaggagatggtttgcagaatcttttt 582

                                                                       
Query: 394 gaatccaccatctgcatttacaaatcgaatacgtgagcatccacatattgtgctactaca 453
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 581 gaatccaccatctgcatttacaaatcaaatacgtgagcatccacatattgtgctactaca 522

                                                                       
Query: 454 aagtgtaaaagggatgagagactagagtaactcatttattcatctacctgttcgacgtgt 513
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aagtgtaaaagggatgagagactagagtaactcatttattcatctacctgttcgacgtgt 462

                                      
Query: 514 tatcatttgatactcactatttgccag 540
           |||||||||||||||||||||||||||
Sbjct: 461 tatcatttgatactcactatttgccag 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 941
Length adjustment: 10
Effective length of query: 530
Effective length of database: 931
Effective search space:   493430
Effective search space used:   493430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)