Query= MSMg01no368_d07.b1 MSMg01no368_d07.b1 CHROMAT_FILE:
MSMg01no368_d07.b1 PHD_FILE: MSMg01no368_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:35 2005
(595 letters)
>mm_chr2_171334906_171335900
Length = 995
Score = 978 bits (506), Expect = 0.0
Identities = 512/514 (99%), Gaps = 2/514 (0%)
Strand = Plus / Minus
Query: 5 gaattcacccacactcc-attctcattgtcactccaaacagcattttcattttggatcta 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcacccacac-ccaattctcattgtcactccaaacagcattttcattttggatcta 455
Query: 64 tggaagttcaaggtctgttagagaataaaatcaaattaatggagggtcggacatctgcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tggaagttcaaggtctgttagagaataaaatcaaattaatggagggtcggacatctgcaa 395
Query: 124 gaaccaagtcaggttccagggtgaaatccttaagaaaagggcaactttcaaggttatgta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaaccaagtcaggttccagggtgaaatccttaagaaaagggcaactttcaaggttatgta 335
Query: 184 gacacagggaaggcacacactgatgttgcagggtcaaaactagctcgctagccaagagtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gacacagggaaggcacacactgatgttgcagggtcaaaactagctcgctagccaagagtc 275
Query: 244 acttggagggacacactgagtacaaagtaggtgtttagaagtacctgggtgactctgtac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 acttggagggacacactgagtacaaagtaggtgtttagaagtacctgggtgactctgtac 215
Query: 304 aatgaccaagtgtcctggctagttttatgtcaatttgacacaggctagagtcatccgagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatgaccaagtgtcctggctagttttatgtcaatttgacacaggctagagtcatccgagg 155
Query: 364 ggaggaacctcaattaagaaaatgcctccataagatctggctgtaggcaagcctgtaagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ggaggaacctcaattaagaaaatgcctccataagatctggctgtaggcaagcctgtaagg 95
Query: 424 catattttaaattaatgattgatgtgggagggctcagtctattgtgggtgcagccattcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 catattttaaattaatgattgatgtgggagggctcagtctattgtgggtgcagccattcc 35
Query: 484 tgggctggtagtcctggcgttcataagaaagcaa 517
||||||||||||||||||||||||||||||||||
Sbjct: 34 tgggctggtagtcctggcgttcataagaaagcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_d07.g1 MSMg01no368_d07.g1 CHROMAT_FILE:
MSMg01no368_d07.g1 PHD_FILE: MSMg01no368_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:35 2005
(379 letters)
>mm_chr2_171124535_171125314
Length = 780
Score = 658 bits (340), Expect = 0.0
Identities = 364/372 (97%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 1 cagagctgtgctaaattacgtggtttgtggcatgtcagagtcacaaccattcaggtaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 cagagctgtgctaaattacgtggtttgtggcatgtcagagtcacaaccattcacgtaagt 260
Query: 61 atatgagtggatccctgcagtgtggacctgtcggggactgctaaagaaacgaggcacttg 120
|||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 261 atatgagtggatccctgcagtgtggatctgtcggggactgctaaagaaaagcggcacttg 320
Query: 121 ctgtcaagtcaatgtgacccatagttacttttt-ggcccaaaagcaagaccagaaaatta 179
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ctgtcaagtcaacgtgacccatagttacttttttggcccaaaagcaagaccagaaaatta 380
Query: 180 atcctaccagtaggtgattagtgaagtgctgagcttacatttgccctttgcaaactgaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctaccagtaggtgattagtgaagtgctgagcttacatttgccctttgcaaactgaca 440
Query: 240 atattctctggtgtcaggcaactcaccctccaatagggcagacagcattctcctgcactg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattctctggtgtcaggcaactcaccctccaatagggcagacagcattctcctgcactg 500
Query: 300 actcttttatcacacctatatccaaccctgaagggtgtgtgtgtgtgtgtgtgtgtgtgt 359
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttttttatcacaactatatccaaccctgaagggtgtgtgtgtgtgtgtgtgtgtgtgt 560
Query: 360 gtgtgtgtgtgt 371
||||||||||||
Sbjct: 561 gtgtgtgtgtgt 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
