Query= MSMg01no368_m11.b1 MSMg01no368_m11.b1 CHROMAT_FILE:
MSMg01no368_m11.b1 PHD_FILE: MSMg01no368_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(250 letters)
>mm_chr2_18618996_18619645
Length = 650
Score = 455 bits (235), Expect = e-132
Identities = 247/251 (98%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 1 gtagaaaataaatagaacatagaaaataaagagcaaagcacttactaaaaatggagggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtagaaaataaatagaacatagaaaataaagagcaaagcacttactaaaaatggagggtg 260
Query: 61 tagcaatttaggagtttgaattgtctaaagactgaaactaagcaccaggacctttaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcaatttaggagtttgaattgtctaaagactgaaactaagcaccaggacctttaagtt 320
Query: 121 gtgaggggttttttgttttgtttttgtttttgtttttgttttttta-gtcttcaaaatgc 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gtgaggggttttttgttttgtttttgtttttgtttttgtttttttaagtcttcaaaatgc 380
Query: 180 tacctgtaactgaaaataaattaagtacactccattagcaattttaataattcactccgg 239
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacagggaactgaaaataaattaagtacactccattagcaattttaataattcactccgg 440
Query: 240 gtttccctcta 250
|||||||||||
Sbjct: 441 gtttccctcta 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no368_m11.g1 MSMg01no368_m11.g1 CHROMAT_FILE:
MSMg01no368_m11.g1 PHD_FILE: MSMg01no368_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(244 letters)
>mm_chr2_18788179_18788823
Length = 645
Score = 433 bits (224), Expect = e-126
Identities = 240/246 (97%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 1 acatatttagaaatctaaagtaagactcgacttgtctatgtgctccatagcttttcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acatatttagaaatctaaagtaagactcgacttgtctatgtgctccatagcttttcttta 386
Query: 61 tgaattaaaatcccctgcaaaaaggaaagtttctctgctt--gagcactgcctcctgggg 118
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 tgaattaaaatcccctgcaaaaaggaaagtttctctgcttgagagcactgcctcctgggg 326
Query: 119 atttcagaagtgacttcctgcctcccatcaggcatttggccagcacatctctgaggatgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttcagaagtgacttcctgcctcccatcaggcatttggccagcacatctctgaggatgc 266
Query: 179 ttttgaaaacctgtgccatagactaggtgctgcggagatcaaggactgtggtttttttcc 238
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 265 ttttgaaaacctgtgccatagactaggtgctgtggagatcaaggactgtg-ttttatccc 207
Query: 239 actttg 244
||||||
Sbjct: 206 actttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
