XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCGGAATTCACT
AGTGTCTCATATCAACCTTGTAATCCTGTATTAATTAATTTTTCAATACA
CATGTGGACATATACATACTTGGCCTGGAACACTGCATGTCAAACACTGC
CTTTCTCTCAGTCCTGGTTTCCTTAGTATTATATCTTCCTTCATAGCTTC
CAATCTCTCATTGAACAGAGCTATCAGCTGATGAAAACTTAAGTGTCTTA
ACGCGACCCAGTTCCTTTATTTTGCCACAGATATGCAGTCTTTGCCTCAA
GGAAGGGCCAGTATTTATATTACTTATTTTTTCTGCTCCCTTAACATTCA
TACCAATCTTATTCCTCTCCACACATCATGGCATCATACACAAGACTAAA
TTGAAGATTTATTTCTCATGTAGAAGCCTTTCCGTGTTCAGTAGGTCAGA
GGTAGAACACTCAGTCATTGGCATAATTTCTTACACTGAGCGATGGTTAA
GGTCCCCATCTGCTTGTTGAATTAAGGATTTTCTTCCCTTCTTCTGTTAT
GGATCTGGTCTAATGCTGCTTGTATGATGTTAATTTGGTCTCCAAAATTC
CACAAGAATCTGCACATACACACATAAGATGCTGAGGGACCCTCCCCCGG
TTGGTTTTGATTAGTAAATAAAGTTGCTGATGCCCACTGGCTGGGCTGGG
AATCTAGGATTCCTGNNGCAGGGTCTGAAGAG

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCATGA
ATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAATGAGATGATC
ATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTGATGGA
TTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGT
CAGGATGGATGATTGCTTTAATGTGTTCTTGAATTCGGTTAGCGAGAATT
TTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTT
CTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGG
CTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAAA
AGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCATCTGGTCCTGGGCTTTTTTTTGGCTGGGAGACTATTT
ATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAAC
TTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCA
TTTCATCCCAGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTANAAGGAT
CTGATGGGGGTTTGGATTTCTTCAGAACTGGTGGTATGTCTCCCTTTTCA
ATTCG

Query= MSMg01no368_o17.b1 MSMg01no368_o17.b1 CHROMAT_FILE:
MSMg01no368_o17.b1 PHD_FILE: MSMg01no368_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:30 2005
         (592 letters)



>mm_chr2_8097006_8097999
          Length = 994

 Score =  982 bits (508), Expect = 0.0
 Identities = 573/596 (96%), Gaps = 6/596 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   accttgtaatcctgtattaattaatttttcaatacacatgtggacatatacatacttggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 accttgtaatcctgtattaattaatttttcaatacacatgtggacatatacatacttggc 623

                                                                       
Query: 61  ctggaacactgcatgtcaaacactgcctttctctcagtcctggtttccttagtattatat 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 622 ctggaacactgcatgtcaaacactgcctttctctcaatcctggtttccttagtattatat 563

                                                                       
Query: 121 cttccttcatagcttccaatctctcattgaacagagctatcagctgatgaaaacttaagt 180
           |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 562 cttccttcatagcttccagtctctgattgaacagagctatcagctgatgaaaac-taagt 504

                                                                       
Query: 181 gtcttaacgcgacccagttcctttattttgccacagatatgcagtctttgcctcaaggaa 240
           ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtcttaaagggacccaggtcctttattttgccacagatatgcagtctttgcctcaaggaa 444

                                                                       
Query: 241 gggccagtatttatattacttattttttctgctcccttaacattcataccaatcttattc 300
           ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 443 gggccagtagttatattacttattttttctgttcccttaacattcataccaatcttattc 384

                                                                       
Query: 301 ctctccacacatcatggcatcatacacaagactaaattgaagatttatttctcatg--t- 357
           ||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||  | 
Sbjct: 383 ctctccatacaccatggcgtcatacacaagactaaattgaaaatttatttctcatgcatg 324

                                                                       
Query: 358 -agaagcctttccgtgttcagtaggtcagaggtagaacactcagtcattggcataatttc 416
            ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 323 cagaagcctttctgtgttcagtaggtcagaggcagaacactcagtcattggcataatttc 264

                                                                       
Query: 417 ttacactgagcgatggttaaggtccccatctgcttgttgaattaaggattttcttccctt 476
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 263 ttacactgagcgatggttaaggtccccatctgcttgttgaattaa-gattttcttccctt 205

                                                                       
Query: 477 cttctgttatggatctggtctaatgctgcttgtatgatgttaatttggtctccaaaattc 536
           |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 204 cttctgttatggatttggtctaatgctgcttgtatgatgttaatttcgtctccaaaattc 145

                                                                   
Query: 537 cacaagaatctgcacatacacacataagatgctgagggaccctcccccggttggtt 592
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 144 cacaagaatctgcacatacacacataagatgctgagggaccctcccccagttggtt 89


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 994
Length adjustment: 10
Effective length of query: 582
Effective length of database: 984
Effective search space:   572688
Effective search space used:   572688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)