Query= MSMg01no369_i16.b1 MSMg01no369_i16.b1 CHROMAT_FILE:
MSMg01no369_i16.b1 PHD_FILE: MSMg01no369_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:18 2005
(340 letters)
>mm_chr2_162968031_162968770
Length = 740
Score = 536 bits (277), Expect = e-157
Identities = 326/351 (92%), Gaps = 15/351 (4%)
Strand = Plus / Plus
Query: 5 gaattcctgttctcacttctctcagtgatggactgttacctggaagtataagctaaaaac 64
||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 190 gaattcctgcactgacttctctcagtgatggactgttacctggatgtataagctaaaaac 249
Query: 65 aa---caacaacaacaacaac------------tctttcctctcagagttgcttttggtc 109
|| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 250 aaaaacaacaacaacaacaacaacacccccaactctttcctctcagagttgcttttggtc 309
Query: 110 acggcgtttttattacagaaagagaaccccataaaagacacccagcttatctgtgtagtc 169
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atggcgtttttattacagaaagagaaccccataaaagacacccagcttatctgtgtagtc 369
Query: 170 agtttgtcacatttccacatgtgtccttgagttgtctccatggtcagactgggcaaaggc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agtttgtcacatttccacatgtgtccttgagttgtctccatggtcagactgggcaaaggc 429
Query: 230 tggggaccagacaaggggtctactctgttttattcggcagtagtacactactataggggt 289
|||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 430 tggggaccagacaaggagtctactctgtcttatttggcagcagtacactactataggggt 489
Query: 290 ggcaacgggtgttgggttagttgaaacacagagggtcctcctgcctcaggc 340
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 490 ggcaacgggtgttggtttagttgaaacacagagggtcctcctgcctcaggc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_i16.g1 MSMg01no369_i16.g1 CHROMAT_FILE:
MSMg01no369_i16.g1 PHD_FILE: MSMg01no369_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:18 2005
(372 letters)
>mm_chr2_163164030_163164801
Length = 772
Score = 719 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Minus
Query: 1 tttctgctctcctgggtgcagggtccaactgtggacaaaccagggatgtttttaggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tttctgctctcctgggtgcagggtccaactgtggacaaaccagggatgtttttaggaaga 513
Query: 61 aacttccataagccctggcttctttgcccagctttgtaatcttgttgggggtctggggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aacttccataagccctggcttctttgcccagctttgtaatcttgttgggggtctggggtt 453
Query: 121 gtctagaggtcgtggggactcaggcggactttctccatgccttcaggtacccaacaccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtctagaggtcgtggggactcaggcggactttctccatgccttcaggtacccaacaccgt 393
Query: 181 cctcatctgtatggtgatcttgctgaacatcggcctggctatcctatttgttcacctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctcatctgtatggtgatcttgctgaacatcggcctggctatcctatttgttcacctcct 333
Query: 241 gacttgaccctcatctaccaggtatggccagaggatgcagcctggaaaccagggtggtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gacttgaccctcatctaccaggtatggccagaggatgcagcctggaaaccagggtggtgg 273
Query: 301 ggcttggtacttggtactgggctgctaggtaaagcccaccccctagtgtacaggtgtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggcttggtacttggtactgggctgctaggtaaagcccaccccctagtgtacaggtgtgat 213
Query: 361 actccttgcatc 372
||||||||||||
Sbjct: 212 actccttgcatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
