Query= MSMg01no369_l07.b1 MSMg01no369_l07.b1 CHROMAT_FILE:
MSMg01no369_l07.b1 PHD_FILE: MSMg01no369_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:30 2005
(257 letters)
>mm_chr2_59486406_59487062
Length = 657
Score = 466 bits (241), Expect = e-136
Identities = 253/257 (98%)
Strand = Plus / Plus
Query: 1 attctccgcagcacagtagtcagctgtaacctccaggtgtaaacagaccttcatcagcat 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctccgcagtacagtagtcagctgtaacctccaggtgtaaacagaccttcatcagcat 260
Query: 61 cattgaaaagcgctttgaggagccagacagagctctgtgggacgccggccatcaaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 cattgaaaagcgctttgaggagccagacagagctctgtgggacgccgtccatcaaaaagt 320
Query: 121 catttgctggagccttgtttctggctgtgacgttttacccccggtggctagcaggctctg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catttgccggagccttgtttctggctgtgacgttttacccccggtggctagcaggctctg 380
Query: 181 tagagctttgcctcaaggagaggtggagggtatctccgttcatttggagtctgctttcaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tagagctttgcctcaaggagaggtggagggtatctccgttcatttggagtctgctttcta 440
Query: 241 cagtctcctttgctttt 257
|||||||||||||||||
Sbjct: 441 cagtctcctttgctttt 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_l07.g1 MSMg01no369_l07.g1 CHROMAT_FILE:
MSMg01no369_l07.g1 PHD_FILE: MSMg01no369_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:30 2005
(292 letters)
>mm_chr2_59647386_59648077
Length = 692
Score = 451 bits (233), Expect = e-131
Identities = 275/293 (93%), Gaps = 10/293 (3%)
Strand = Plus / Minus
Query: 1 tcattaaagtatggagggcaggtgctgccagcttattccttctgttcttttataatttac 60
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 341 tcattaaagtatggagggcaggtgctgccagcctactccttctgttcttttataatttac 282
Query: 61 taattttacagataagccaaaagcttgctagactcagaaagaggaccaatgttatagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taattttacagataagccaaaagcttgctagactcagaaagaggaccaatgttatagtca 222
Query: 121 cttaaacctgatttctttttttttttaattagatattttctttatttacatttcaaatgc 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cttaaacctgatttc--tttttttttaattagatattttctttatttacatttcaaatgc 164
Query: 181 tatcccgaaagttccctatacccttccccgctccctgctcccctacccacccactcccac 240
||||||||||||||||||||| | ||||| | |||||||||||||||||||| |||||||
Sbjct: 163 tatcccgaaagttccctatactc-tccccacaccctgctcccctacccaccccctcccac 105
Query: 241 ttcttggccctg---ttttttcccctgtactgaggtatataaagtttgcaaga 290
|||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 104 ttcttggccctgaca----ttcccctgtactggggcatataaagtttgcaaga 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
