Query= MSMg01no370_k24.b1 MSMg01no370_k24.b1 CHROMAT_FILE:
MSMg01no370_k24.b1 PHD_FILE: MSMg01no370_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:49 2005
(441 letters)
>mm_chr2_103282918_103283758
Length = 841
Score = 777 bits (402), Expect = 0.0
Identities = 429/438 (97%)
Strand = Plus / Minus
Query: 4 ggaattctcaaagaacacatagaaatgtttttaaaacagaagctccaacgttcccgttcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggaattctcaaagaacacatagaaatgtttttaaaacagaagctccaacgttcccgttcc 582
Query: 64 ctgcctccatctccagacatgaactaattgttgggattgtgggccatttgagatccccct 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 581 ctgcctccatctccagacatgaactaattgttgggattgtgggtcatttgagatccccct 522
Query: 124 attccaccatcctttaattatcaatgacttagcaatgggttcagattattctgaaatatc 183
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 521 attccaccatcctttaattatcaacgacttagcaatgggtttagattattctgaaatatc 462
Query: 184 agcaaccataggatcggtaaaggctggaagccattggcaccatggctaatgggcactggc 243
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agcaaccataggaccggtaaacgctggaagccattggcaccatggctaatgggcactggc 402
Query: 244 tttatagtattctcactgcaggcacctacaaggccctttaccagacacaaatttcattgg 303
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 401 tttatagtattctcactgcaggcacctacaaggccctttaccaggcacaaatttcattgc 342
Query: 304 ttcttaaactcaccacaaccccgaagggccctgatattttatagacagggagtcttaagg 363
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttcttaaactcaccacagccctgaagggccctgatattttatagacagggagtcttaagg 282
Query: 364 aggacttgagttattgtcccacagaccccaccttccctgtcacactcttttaacccattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggacttgagttattgtcccacagaccccaccttccctgtcacactcttttaacccattt 222
Query: 424 tctctactctttctccaa 441
||||||||||||||||||
Sbjct: 221 tctctactctttctccaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_k24.g1 MSMg01no370_k24.g1 CHROMAT_FILE:
MSMg01no370_k24.g1 PHD_FILE: MSMg01no370_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:49 2005
(416 letters)
>mm_chr2_103093597_103094414
Length = 818
Score = 758 bits (392), Expect = 0.0
Identities = 408/414 (98%), Gaps = 2/414 (0%)
Strand = Plus / Plus
Query: 5 ttaaaattcaatgacgtgcaataggtgggggagacccaagtgagaactcttaaagaatat 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttaaaattcaatgacgtgcaatgggtgggggagacccaagtgagaactcttaaagaatat 264
Query: 65 gcagaagccatttttttt--aatgcagacacaatggctaaatatctcaaaatctacatat 122
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 gcagaagccatttttttttaaatgcagacacaatggctaaatatctcaaaatctaaatat 324
Query: 123 atactgtaattgagaacttcagtaagctagatctaacaagaaaaagaatttcataaattg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atactgtaattgagaacttcagtaagctagatctaacaagaaaaagaatttcataaattg 384
Query: 183 aaccaagagcttttgaaataaatccagtcagaaaagaaaagtaaaggaataaaaaggaaa 242
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 385 aaccaagagcttttgaaataaatccagtcagaaaggaaaaggaaaggaataaaaaggaaa 444
Query: 243 gaaaaaagaccgttttcaagcctctcggaacacgattaaataaacaaatatctgcatgct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaaaaagaccgttttcaagcctctcggaacacgattaaataaacaaatatctgcatgct 504
Query: 303 agggatttgagaagagagggcaaaagtcactagaatctatacagcagaataatagctgag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agggatttgagaagagagggcaaaagtcactagaatctatacagcagaataatagctgag 564
Query: 363 tcttggctcttaaaagtgatgggggtttatttattcataaaatccgaaggaccc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcttggctcttaaaagtgatgggggtttatttattcataaaatccgaaggaccc 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 818
Length adjustment: 9
Effective length of query: 407
Effective length of database: 809
Effective search space: 329263
Effective search space used: 329263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
