Query= MSMg01no370_n15.b1 MSMg01no370_n15.b1 CHROMAT_FILE:
MSMg01no370_n15.b1 PHD_FILE: MSMg01no370_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:01 2005
(378 letters)
>mm_chr2_171201373_171202150
Length = 778
Score = 547 bits (283), Expect = e-160
Identities = 304/311 (97%)
Strand = Plus / Minus
Query: 5 gaattcttcaatcctgaacaaaatttctctaaggtaactcaatagaatttaattacacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaattcttcaatcctgaacaaaatttctctaaggtaactcaatagaatttaattacacat 252
Query: 65 ttaaaaattttagatttactcattttatgtgtgacttttattttgctttttgtctacatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttaaaaattttagatttactcattttatgtgtgacttttattttgctttttgtctacatg 192
Query: 125 tatgtacgtgtacgcaccatgcatcatggaggtcggaagaggatgttaaagagcgcctgg 184
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 191 tatgtacgtgtacgcaccatgcaccatggaggtcggaagaggatgttaaagatcgcctgg 132
Query: 185 aattggaatcgtaggtggttgtgaagcgccatgtgggtcctggggacgacacctaggtac 244
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131 aattggaattgtaggtggttgtgaagcgccatgtgggtcctcgggacgacacctaggtac 72
Query: 245 tcagggagatcagcaaatgctcgtaatcactgagccatggctccagctctaaatgttatt 304
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcaggaagatcagcaaatgctcataatcactgagccatggctccagctctaaatgttatt 12
Query: 305 ctattcaaata 315
||||||||||
Sbjct: 11 gtattcaaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_n15.g1 MSMg01no370_n15.g1 CHROMAT_FILE:
MSMg01no370_n15.g1 PHD_FILE: MSMg01no370_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:02 2005
(380 letters)
>mm_chr2_171025421_171026200
Length = 780
Score = 688 bits (356), Expect = 0.0
Identities = 372/380 (97%), Gaps = 5/380 (1%)
Strand = Plus / Plus
Query: 1 attcactgattcattaactcccgacaaaggagccactgggtttctttatttaaagaaaag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 206 attcactgattcattaactcccgacaaaggagccactgggtttatttatttaaagaaaag 265
Query: 61 aatacttgaaaaattaaaatattaaggtgttgtggctatgcctttaatcccagcactctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatacttgaaaaattaaaatattaaggtgttgtggctatgcctttaatcccagcactctg 325
Query: 121 gaggtggaagaagagccagaactcagcagatctctgtgagtctgagaccagtccagtcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaggtggaagaagagccagaactcagcagatctctgtgagtctgagaccagtccagtcta 385
Query: 181 tatagtaaagtatcaggacattcgggactaaataatgagacgttgtctcataaaaacaaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tatagtaaagtttcaggacattcgggactaaataatgagacgttgtctcataaaaacaaa 445
Query: 241 acaaaacaaaacaaaaaatgaattaaaattaaataatacatggaactttagttagaggtg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acaaaacaaaa-----aatgaattaaaattaaataatacatggaactttagttagaggtg 500
Query: 301 gaagctatttcaacaccaaaatagaaattattttatgtaataaaactgtatctctatgtg 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gaagctatttcaacaccaaaatagaaaatattttatgtaataaaactgtatctctatgtg 560
Query: 361 aaaatctcacaaaaataatg 380
||||||||||||||||||||
Sbjct: 561 aaaatctcacaaaaataatg 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
