Query= MSMg01no371_g24.b1 MSMg01no371_g24.b1 CHROMAT_FILE:
MSMg01no371_g24.b1 PHD_FILE: MSMg01no371_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:53 2005
(389 letters)
>mm_chr2_8565468_8566252
Length = 785
Score = 644 bits (333), Expect = 0.0
Identities = 374/389 (96%), Gaps = 4/389 (1%)
Strand = Plus / Minus
Query: 1 atataaattggtggggcatatggcatatacattttattaactcattagtttcagtcctgt 60
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 585 atataaactggtggggcatatggcatatacattttattaactca-gagtttcagtcctgt 527
Query: 61 tccagcaagtgaaaggtaataataggaatattcaatattacttttcagaataattacaaa 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tccatcaagtgaaaggtaataataggaatattcaatattacttttcagaataattacaaa 467
Query: 121 tgtttttctcataagccatcagctttggggattattgttattcatttggatttttgctct 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 466 tgtttttctcataagccatcagctttggggattattg---ttcatttggatttttgctct 410
Query: 181 ttttttcatggcatgaggaatgttcagtaatacgacaaaaaaaactctctggttataatt 240
||||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||
Sbjct: 409 ttttttcatggcatgaggaatgttcggtaataagataaaaaaacctctctggttataatt 350
Query: 241 agtacaaattttaagaaggttttcatgtttaaaaccttggagaaaatgaaactagatccc 300
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 349 agtacaaattttaaaaaggttttcatgtttaaaatcttggagaaaatgaaactagatccc 290
Query: 301 attatattcaaaaataattgatttttgaaaacaatgtttaatatgcccttttagacaaca 360
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 289 attatattcaaaaataattgattttcgaaaacaatgtttaatatgtccttttagacaaca 230
Query: 361 catttccttctgaaatattgataataaat 389
|||||||||||||||||||||||||||||
Sbjct: 229 catttccttctgaaatattgataataaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 785
Length adjustment: 9
Effective length of query: 380
Effective length of database: 776
Effective search space: 294880
Effective search space used: 294880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_g24.g1 MSMg01no371_g24.g1 CHROMAT_FILE:
MSMg01no371_g24.g1 PHD_FILE: MSMg01no371_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:53 2005
(443 letters)
>mm_chr2_8496700_8497542
Length = 843
Score = 849 bits (439), Expect = 0.0
Identities = 439/439 (100%)
Strand = Plus / Plus
Query: 5 ggaattctcatggtcaagatttctcttctgagcaatagaacaatgaccagacctcttata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctcatggtcaagatttctcttctgagcaatagaacaatgaccagacctcttata 264
Query: 65 cagtctatataggtatgctgttttatgtcaaaagagaaaagacttgaagcattgtctaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagtctatataggtatgctgttttatgtcaaaagagaaaagacttgaagcattgtctaca 324
Query: 125 ctggtgaattaatcagttagaggtttaatcaaaaaacaaggagaaaatgaagtgtgctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctggtgaattaatcagttagaggtttaatcaaaaaacaaggagaaaatgaagtgtgctaa 384
Query: 185 caaacttatactttacatgtatggagcttatggagtactttgtagtggttctctattaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaacttatactttacatgtatggagcttatggagtactttgtagtggttctctattaat 444
Query: 245 atgaccataaaaaattgtcagcaataatgctaatagaacaacctaccttataaacaacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgaccataaaaaattgtcagcaataatgctaatagaacaacctaccttataaacaacat 504
Query: 305 ttattctgacatcagcatgactactctatgtgtcaatatataaattggtaatcataaggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttattctgacatcagcatgactactctatgtgtcaatatataaattggtaatcataaggt 564
Query: 365 gggtatagatacataagaagattgaaataattcctcacacaaaatttactgtcctctgta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggtatagatacataagaagattgaaataattcctcacacaaaatttactgtcctctgta 624
Query: 425 ggtagtagcatatatctgt 443
|||||||||||||||||||
Sbjct: 625 ggtagtagcatatatctgt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
