CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATTGTGA
ATGGGTTTTGGATTTTGTCATGCTTTCTCTGCATCTAACGAGATGAACAT
GTGGTTTTTGTCTTTGAGTTTGTTTATGTAATGGATTACGTTGATGGATT
TTCATATATTAAACCATCCCTGCATCCCTGGAATGAAACCTACTTGGTCA
CGATGATCGTTTTGATGTGATTTTGGATTCGGTTAGTGAGAATTTTATTG
AGTATTTTTGCATCAATATTCATAAGGGAAATTGGTCTGAAGTTCTCTAT
CATTGGTGGATCTTCCTGTGTATCAGAAAGTAATTGTGGGATCAGAGTAA
TTGTGGCTTCATAGAATGAATTAGGTAGAGTACTTTCTGCTTCTCTTTTG
TGGAATAGTTGTGAACAACTGGACTTACCTCTTTGAAGGTCTGATAGAAC
TCTGCACTAAACACTTCTGGTCCAGGGCTTTTTTTGGTTGGGAGACTATT
AATGACTTCTTCAATTTCTTTAGGGGATATAGGTATATTTATATCATTTA
CCCTGATCCGATTTTTCTCTTGTTCATGGGATCCGTTCATATTCTGTTTC
TTTCCTTCACTTTTTTTCCCTTCCGCGCTTATTCCTTTTTGCTTACTCTC
CCCGTGCCTTTTTGACCCTCTTTTGTCTTACTTCCTTTGACTTCCTCTCT
TCTTTTTCACCCCCA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTAAGAGTTAATGAATTCAAAGCATCTTCTTTCACTTAGTCACACT
TGTAGATATAACAGTAATTAGAGCATTTCTGGTTTAAAAAAAAAGGTAAG
TCTAAATGCTAGATTGAAAGGTCCTGTTCAGACACCCTTGTTATTACAGA
TTTTATTTGACCTTTAAAATGAACTATTCAATTTCTTGCAATATAAAACT
ATGTAGACTATTTTCCAGCATTACTAGACTTATTTCATTAACTGAAGCGG
CGTGTTAAAATTACTACATTATTAACAGATTTTTCAAAGATTTTTTTTAA
ATTCCATATTAAATTTATTTCTATGGTAATATAATTTTATTAATGTGGTA
TAGTTTTAATCTTAATTCAAGCTTTGTAAAAAATATCTTATTTCACAAAA
TTAATTTTATACTATACAAGTCATGGAATGCATAATCTTAATGCATAAAA
AAATAGAGACCCAAGTCTACAATTTTAATTAACTCTCTATTACTTAAGAT
TTTAAAGAAAAACGGCAAAATACTGCTGTTATACAAGGAGCCAGAAGTCT
GGAGCAATGACTAACTCTTTCGTTGAAGCACCCTGTCTTGTTTTGCTCTT
CCTTGGATTAATTGTCATTTGCTCCTATCCTTTGTAAAGAAAAGTGACAT
AATTTTTCTTTCCAACAAGGGTTAGGTTTGGGCCATTGGCATGTACCGGA
AGGGTTAATTTTAATTCTAN

Query= MSMg01no371_l05.g1 MSMg01no371_l05.g1 CHROMAT_FILE:
MSMg01no371_l05.g1 PHD_FILE: MSMg01no371_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:15 2005
         (534 letters)



>mm_chr2_98389345_98390279
          Length = 935

 Score =  936 bits (484), Expect = 0.0
 Identities = 520/532 (97%), Gaps = 1/532 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccttaagagttaatgaattcaaagcatcttctttcacttagtcacacttgtaga 63
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ggaatttcttaagagttaatgaattcaaagcatcttctttcacttagtcacacttgtaga 676

                                                                       
Query: 64  tataacagtaattagagcatttctggtttaa-aaaaaaaggtaagtctaaatgctagatt 122
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 675 tataacagtaattagagcatttctggtttaataaaaaaaggtaagtctaaatgctagatt 616

                                                                       
Query: 123 gaaaggtcctgttcagacacccttgttattacagattttatttgacctttaaaatgaact 182
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaaaggtgctgttcagacacccttgttattacagattttatttgacctttaaaatgaact 556

                                                                       
Query: 183 attcaatttcttgcaatataaaactatgtagactattttccagcattactagacttattt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attcaatttcttgcaatataaaactatgtagactattttccagcattactagacttattt 496

                                                                       
Query: 243 cattaactgaagcggcgtgttaaaattactacattattaacagatttttcaaagattttt 302
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cattaactgaagcgacgtgttaaaattactacattattaacagatttttcaaagattttt 436

                                                                       
Query: 303 tttaaattccatattaaatttatttctatggtaatataattttattaatgtggtatagtt 362
           |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 435 tttaaaatccatattaaatttatttctatcgtaatctaattttattaatgtggtatagtt 376

                                                                       
Query: 363 ttaatcttaattcaagctttgtaaaaaatatcttatttcacaaaattaattttatactat 422
           |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 375 ttaatcttaattcaagctttgtaaaaaatatcttatgtcacacaattaattttatactat 316

                                                                       
Query: 423 acaagtcatggaatgcataatcttaatgcataaaaaaatagagacccaagtctacaattt 482
           ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 315 acaagtcatggaatgcataatcttaatgcataaaaaaatcgagacccaagtccacaattt 256

                                                               
Query: 483 taattaactctctattacttaagattttaaagaaaaacggcaaaatactgct 534
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taaataactctctattacttaagattttaaagaaaaacggcaaaatactgct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space:   484700
Effective search space used:   484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)