Query= MSMg01no371_p22.b1 MSMg01no371_p22.b1 CHROMAT_FILE:
MSMg01no371_p22.b1 PHD_FILE: MSMg01no371_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:39 2005
(428 letters)
>mm_chr2_93970717_93971544
Length = 828
Score = 712 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 61 actaggtggtgattttggcacctcacacttatttagatattattttctgtctcagttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 actaggtggtgattttggcacctcacacttatttagatattattttctgtctcagttact 769
Query: 121 gctactgaaaaacaaactacacttacaatgtgattgcttaaagtaacaaccacttcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gctactgaaaaacaaactacacttacaatgtgattgcttaaagtaacaaccacttcattg 709
Query: 181 caaggcagtgggtcaaaaaaatgggcagggctcacagagatgcctcacccgtgtgccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 caaggcagtgggtcaaaaaaatgggcagggctcacagagatgcctcacccgtgtgccata 649
Query: 241 taggatcagcaaagatggttttgctgaggcaggaaaggaccctacttttgtggggcctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 taggatcagcaaagatggttttgctgaggcaggaaaggaccctacttttgtggggcctat 589
Query: 301 ttctgacttatttatatctgaaattttgacttccctcctcaaggcttctcatttaatagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttctgacttatttatatctgaaattttgacttccctcctcaaggcttctcatttaatagg 529
Query: 361 tttggcttatgagacaacatcttactgtgtagccaggtttgccagagttcatggtaatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tttggcttatgagacaacatcttactgtgtagccaggtttgccagagttcatggtaatac 469
Query: 421 ttctgccc 428
||||||||
Sbjct: 468 ttctgccc 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_p22.g1 MSMg01no371_p22.g1 CHROMAT_FILE:
MSMg01no371_p22.g1 PHD_FILE: MSMg01no371_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:39 2005
(400 letters)
>mm_chr2_93811257_93812057
Length = 801
Score = 410 bits (212), Expect = e-119
Identities = 233/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcaagcagtaacagttgccgttgctccagccagtcctttggttggatctcagt 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcttcaagcaggaacagttgccgttgctccagccagtcctttggttggatctcaat 264
Query: 65 gcttggttttcccgagtattgatctcaggccctggttccagtgtagaacagtgtgtgcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcttggttttcccgagtattgatctcaggccctggttccagtgtagaacagtgtgtgcct 324
Query: 125 atcatgtccccc-aagtctaccctcccaggtaaagaatactaccctcaagcctttattca 183
|||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 atcatgtccccccaagtctatcctcccaggtaaagaatactaccctcaagcttttattca 384
Query: 184 aacagaatcagagacgggggtaacttcccagaggccacacagtcgggcagaggcgggttg 243
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 aacagaatcagagacgggggaaacttcctagaggccacacagtcgggcagaggcgggttg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 801
Length adjustment: 9
Effective length of query: 391
Effective length of database: 792
Effective search space: 309672
Effective search space used: 309672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
