Query= MSMg01no372_i18.b1 MSMg01no372_i18.b1 CHROMAT_FILE:
MSMg01no372_i18.b1 PHD_FILE: MSMg01no372_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:19 2005
(322 letters)
>mm_chr2_84901543_84902264
Length = 722
Score = 501 bits (259), Expect = e-146
Identities = 301/323 (93%), Gaps = 16/323 (4%)
Strand = Plus / Plus
Query: 4 ggaattccctgtttaccaatgaggatccttaggcccagagtagttaagtgatttgctcaa 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctgtttaagaatgaggatccttaggcccagagtagttaagtgatttgctcaa 263
Query: 64 ggtcacacagctgaaatcctggcagcggtcttctgctaaagtggggctctaaggccctag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtcacacagctgaaatcctggcagcggtcttctgctaaagtggggctctaaggccctag 323
Query: 124 gtagctatcactctcaagttggaatgactcccacacagattaattctaaaattcttccct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtagctatcactctcaagttggaatgactcccacacagattaattctaaaattcttccct 383
Query: 184 ctctccctccctctctcccttcctccctttccctcccatcctctttctttccttttcttt 243
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctccct------------tcctccctttccctcccatcctctttctttccttttcttt 431
Query: 244 tgtttactttcttttcttttctttt-tttt-tttttt--tttttggcctttcctcttccc 299
||||||||||||||||||||||||| |||| |||||| |||||| | |||| |||||||
Sbjct: 432 tgtttactttcttttcttttcttttcttttattttttcttttttgtcttttcttcttccc 491
Query: 300 ctggttcccagggactccttggc 322
||| |||||||||||||||||||
Sbjct: 492 ctgtttcccagggactccttggc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_i18.g1 MSMg01no372_i18.g1 CHROMAT_FILE:
MSMg01no372_i18.g1 PHD_FILE: MSMg01no372_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:19 2005
(467 letters)
>mm_chr2_85082306_85083172
Length = 867
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%)
Strand = Plus / Minus
Query: 1 aaagacagaaaaatcttggaagaagcaagtgattttacaaacatacaaacaacatcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaagacagaaaaatcttggaagaagcaagtgattttacaaacatacaaacaacatcaata 402
Query: 61 gtgacaaatatcacattaaaatgagagacagacactggggagaatctataaaccaaacat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 401 gtgacaaatatcacattaaaatgagagacagacactggggaggatctataaaccaaacat 342
Query: 121 gccattccttatgacaggaagcctttgcagggtcttaatttagtttgaaataaattgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gccattccttatgacaggaagcctttgcagggtcttaatttagtttgaaataaattgtga 282
Query: 181 tgaacagaggcttctccccttaggtaggagatgaggggcaataagagcagaggtagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgaacagaggcttctccccttaggtaggagatgaggggcaataagagcagaggtagagaa 222
Query: 241 gcttcttgagagtcaggttatgtgaagaaaagaagataaatttatgatgaattatagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gcttcttgagagtcaggttatgtgaagaaaagaagataaatttatgatgaattatagagg 162
Query: 301 tagagctaacttggcaatggactggactgggttgaaaaatgaagaagaggaatcgaggat 360
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 161 tagagctaacatggcaatggactggactgggttggaaaatgaagaagaggaatcgaggat 102
Query: 361 gatcctgacctttcttaccttaaagatcactgggtctcattaacccaactcagaaataat 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 101 gatcctgacctttcttaccttaaagatcactaggtctcattaacccaactcagaaataat 42
Query: 421 aatggctgaggcacagagaggagaattaatcattaaaaata 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 aatggctgaggcacagagaggagaattaatcattaaaaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
