XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TCATTTCTGAGCCCCATTTTTTAATGGGGTTAATTGATTTTCTGAAGTCC
ACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTT
AGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCCTAT
TGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCAT
TTGTCAATTCTCGATCTTACAGAGCAAGCCATTGCTGTTCTGTTCAGGAA
TCTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGAT
TTGACTATAGTACAAGGAGATAAGTATGGATCGGTTCGCATTCTTCTACA
TGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATACTATCTTTCT
TCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTG
TGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCT
GTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCCCTGTAGTAAA
GCTTTAGGTCAGGCATGGTGATTCCCCCAGAGGTTCTTTTATCCTTGAGA
AGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCCCATGAAATTGTAAATC
GCCCCTTCCAAATCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGGTCAGTTTTCTTTATAACTTTAGAAGGCTTTAC
CAGAGCAGTAGAATATGGAAAGCAACTGAAAAAAAAAAACCTCATTGCAT
GAAAATCTTCTGTGATATATGTAGAGAACACACATGAACACACACACACC
ATTTATCTTTAGAGTAGGAGAAGGCTACTGATTGGTTTGAGTCAATTTTA
TATCATGCCACTTTGCTGAAGCTGCTTATCAGCTGAAGTAATGCTCTGGT
AGAAGTTTTGGGGTCACTTAAATATGCTGATGCTTGCAGCCATTGGACTG
AGCTCAAGACCCCAAAGAGGAAATTAGGAGAAGGACTGAAGGAGTTGAAG
ATGTTTGCAGCCCCATAAGAAGAACAACAATATCAACCAACCAGACCCTC
CAAAGTGCCCAGTGACTAAACCTCCAACCAAAGAATACACATGAAGGGAC
CCATGGCTCCAGCTGCATGTGTAGCAGAGGATGGTCTTATCTGGCATCAA
TGGGAGGGGAGTTCCCTGGTCCTATAAAGGCTTAATGTCCCAGAGTAAGA
GAATGTTAGGGTGTTTGAAACAGAATGGGTTGGGTGGCTAATTCANCCTC
CCCCATAAACCCCCCTTATAGAATCCTTTCTTTTCCTTTTTCTTTCTTAC
CCACTCCCTTGTTCCACCTCTACTCCCCCCTCCACTTTTCCATTTTTTCC
CCATTTCTCTCTTTTTTCCCGCATATTTTTTACCCCTCG

Query= MSMg01no372_i24.g1 MSMg01no372_i24.g1 CHROMAT_FILE:
MSMg01no372_i24.g1 PHD_FILE: MSMg01no372_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:20 2005
         (461 letters)



>mm_chr2_82457422_82458286
          Length = 865

 Score =  841 bits (435), Expect = 0.0
 Identities = 457/467 (97%), Gaps = 6/467 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtcagttttctttataactttagaaggctttaccagagcagtagaatatggaaagcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtcagttttctttataactttagaaggctttaccagagcagtagaatatggaaagcaa 260

                                                                       
Query: 61  ctgaaaaaaaaaaa----cctcattgcatgaaaatcttctgtgatatatgtagagaacac 116
           ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaaaaaaaaaaaaaaccctcattgcatgaaaatcttctgtgatatatgtagagaacac 320

                                                                       
Query: 117 acatgaacacacacacac--catttatctttagagtaggagaaggctactgattggtttg 174
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgaacacacacacacaccatttatctttagagtaggagaaggctactgattggtttg 380

                                                                       
Query: 175 agtcaattttatatcatgccactttgctgaagctgcttatcagctgaagtaatgctctgg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcaattttatatcatgccactttgctgaagctgcttatcagctgaagtaatgctctgg 440

                                                                       
Query: 235 tagaagttttggggtcacttaaatatgctgatgcttgcagccattggactgagctcaaga 294
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaagttttggggtcacttaaatatgctgatgcttgcagccattggactgagctcaaga 500

                                                                       
Query: 295 ccccaaagaggaaattaggagaaggactgaaggagttgaagatgtttgcagccccataag 354
           ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ccccaaagaagaaattaggagaaggactgaaggagttgaaggtgtttgcagccccataag 560

                                                                       
Query: 355 aagaacaacaatatcaaccaaccagaccctccaaagtgcccagtgactaaacctccaacc 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaacaacaatatcaaccaaccagaccctccaaagtgcccagtgactaaacctccaacc 620

                                                          
Query: 415 aaagaatacacatgaagggacccatggctccagctgcatgtgtagca 461
           ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 aaagaatacacatgaagggacccatggcttcagctgcatgtgtagca 667


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 865
Length adjustment: 10
Effective length of query: 451
Effective length of database: 855
Effective search space:   385605
Effective search space used:   385605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)