Query= MSMg01no373_d05.b1 MSMg01no373_d05.b1 CHROMAT_FILE:
MSMg01no373_d05.b1 PHD_FILE: MSMg01no373_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:07 2005
(296 letters)
>mm_chr2_166381794_166382489
Length = 696
Score = 489 bits (253), Expect = e-143
Identities = 283/293 (96%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 gcctctgcctcccaagtgctgggactaaaggcgtgtgccactaccgcccagcgacccctt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 201 gcctctgcctcccaagtgctgggattaaaggcgtgtgccactaccgcccagcgccccctt 260
Query: 61 tctgtcttgatgatcacctgta-ctggtggatttctgctgtatactcagtgcagttctgg 119
|||||||||||||||||||||| || | |||||||||||||| |||||||||||||||||
Sbjct: 261 tctgtcttgatgatcacctgtacct-gcggatttctgctgtacactcagtgcagttctgg 319
Query: 120 aaagcaacagtcagtgcctgtaagtttagaggttgccaacaccagtccaggcctaaatac 179
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 320 aaagcaacagtcagtgcctgtaagtttagaggttgtcaacaccagtccaggcctgaatac 379
Query: 180 aagcttcttcccaaacaccaacacacaactatgtgcgtgcagtacgatacacattagtgc 239
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 aagcttcttccccaacaccaacacacaactgtgtgcgtgcagtacgatacacattagtgc 439
Query: 240 taacccagtagccacacccacccttcagtcccagctcagcatcaaagtgtccc 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taacccagtagccacacccacccttcagtcccagctcagcatcaaagtgtccc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no373_d05.g1 MSMg01no373_d05.g1 CHROMAT_FILE:
MSMg01no373_d05.g1 PHD_FILE: MSMg01no373_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:07 2005
(178 letters)
>mm_chr2_166565249_166565826
Length = 578
Score = 337 bits (174), Expect = 3e-97
Identities = 177/178 (99%)
Strand = Plus / Minus
Query: 1 aagatccaagtcaatatggtgtctgcctctctcctggctgctcatatgctctgttctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagatccaagtcaatatggtgtctgcctctctcctggctgctcatatgctctgttctctt 319
Query: 61 tcccacaggtactcggtggtctctgtcttctgcaaggtgactctgttctccaagtccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcccacaggtactcggtggtctctgtcttctgcaaggtgactctgttctccaagtccatg 259
Query: 121 tgaccgtgactgtccctccccagccaatgcacaccacttactgttctgttcctcagtt 178
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgaccgtgactgtccctcccctgccaatgcacaccacttactgttctgttcctcagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
