Query= MSMg01no373_d09.b1 MSMg01no373_d09.b1 CHROMAT_FILE:
MSMg01no373_d09.b1 PHD_FILE: MSMg01no373_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:07 2005
(478 letters)
>mm_chr2_45001778_45002655
Length = 878
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Minus
Query: 1 aacgttggtgatgctaagccgctttcctatcttttcttttaaaactcgtatgtaagtgaa 60
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 355 aacgttggtgatgctaagcccctttcctatcttttcttttaaaactcctatgtaagtgaa 296
Query: 61 ggttggaggtagaaggtctatgagaggtttgtgctggaatgctcttacacaggctgttgg 120
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 295 ggttggaggtagaaggtctatgagaggtttgtggtggaatgctcttccacaggctgttgg 236
Query: 121 gacctgctcgtcactttcctggggaccattgcatgctttctcagaggacctacccctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gacctgctcgtcactttcctggggaccattgcatgctttctcagaggacctacccctaca 176
Query: 181 taccctacatcagattccagccccttctcactgtctatccttctttcccatttgataaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 taccctacatcagattccagccccttctcactgtctatccttctttcccatttgataaat 116
Query: 241 ttccctcatatttaccattactgaatatagtctgtatttcattaatttattctttatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ttccctcatatttaccattactgaatatagtctgtatttcattaatttattctttatttc 56
Query: 301 tttctactcaaatgtaagctggtttccaggagaaactttggtctatttttttcct 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 tttctactcaaatgtaagctggtttccaggagaaactttggtctatttttttcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_d09.g1 MSMg01no373_d09.g1 CHROMAT_FILE:
MSMg01no373_d09.g1 PHD_FILE: MSMg01no373_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:08 2005
(244 letters)
>mm_chr2_44813201_44813845
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 ttttggacttgagtgtaaataccacacaacttctgacctttggttgactctatttcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttggacttgagtgtaaataccacacaacttctgacctttggttgactctatttcatca 260
Query: 61 ttttcaaaataatagtggataacagcactttttggctatcatgagttcaaatcacttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcaaaataatagtggataacagcactttttggctatcatgagttcaaatcacttgga 320
Query: 121 ttagggagccagaggatacctttttt-cagatgtaagaatatgaaatattgctgggcagt 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ttagggagccagaggatacctttttttcagatgtaagaatatgaaatattgctgggcagt 380
Query: 180 gatggcacacgcctttaattccagcacttgggaggcagaggcaggcagatttctgagttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatggcacacgcctttaattccagcacttgggaggcagaggcaggcagatttctgagttc 440
Query: 240 gaggc 244
|||||
Sbjct: 441 gaggc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
