Query= MSMg01no374_g12.b1 MSMg01no374_g12.b1 CHROMAT_FILE:
MSMg01no374_g12.b1 PHD_FILE: MSMg01no374_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:38 2005
(317 letters)
>mm_chr2_70842503_70843219
Length = 717
Score = 499 bits (258), Expect = e-146
Identities = 294/306 (96%), Gaps = 2/306 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaatgt-tctctctctctctctctctctctctctctctctctttctctcaggc 63
||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 205 gaattccaaatgtgt-tctctctctctctctctctctctctctctctctctctctgaggc 263
Query: 64 accttcataggagggaattcacacctggtactgtgcaagcaaacctggccaaaaacacat 123
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 accttcataggagggaattcacacctggtactgtgcaagcaaacctggtcaaaaacacat 323
Query: 124 ggatgggaaggtcacaggggcccttcccatctcctggaactattggataccggggtataa 183
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggatgggaaggtcacaggggaccttcccatctcctggaactattggataccggggtataa 383
Query: 184 gaactcattgtcttcagctcaggaggaaggctctgctgtaactcagtgggtcacaaaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaactcattgtcttcagctcaggaggaaggctctgctgtaactcagtgggtcacaaaaca 443
Query: 244 acaacagaaagactggagagtaggatgggaggtctttttgagggtgggtgtgggaataaa 303
|||||||||||||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct: 444 acaacagaaagactggagagtaggatgggagggctcagtgagagtgggtgtgggaataag 503
Query: 304 agagga 309
||||||
Sbjct: 504 agagga 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_g12.g1 MSMg01no374_g12.g1 CHROMAT_FILE:
MSMg01no374_g12.g1 PHD_FILE: MSMg01no374_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:38 2005
(395 letters)
>mm_chr2_71027911_71028705
Length = 795
Score = 702 bits (363), Expect = 0.0
Identities = 384/391 (98%)
Strand = Plus / Minus
Query: 5 aagtgagcggcaaggagaagattgacgattttttactttagttaaaataaaatctattac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aagtgagcggcaaggagaagattgacgattttttactttagttaaaataaaatctattac 536
Query: 65 atttcagagtagtaaattttctgccagcctagtgtaagctggctatgatgatcatttgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atttcagagtagtaaattttctgccagcctagtgtaagctggctatgatgatcatttgga 476
Query: 125 gaaagagggggaagtttttctacaagcaaaatacataacttataaaatgttttaaaggac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaagagggggaagtttttctacaagcaaaatacataacttataaaatgttttaaaggac 416
Query: 185 atattgaaatttgtagtatttactaaaatggcataatataaatattttgaaccctcaatt 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atattgaaagttgtagtatttactaaaatggcataatataaatattttgaaccctcaatt 356
Query: 245 ccactgttataggagtttagtgaaaagatttacaggaattgagtcgcaaatatcatgaaa 304
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccactgagaaaggagtttagtgaaaagatttacaggaattgagtcgcaaatatcatgaaa 296
Query: 305 ttttgtttatagaaacgaaaatattgaagaagactaacaatcccatgctggtttggctgt 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 295 ttttgtttatagaaacgaaaatattgaagaagactaagaatcccatgctggtttggctgt 236
Query: 365 tattgcatagaatgcatatgtttgtagcata 395
||||| |||||||| ||||||||||||||||
Sbjct: 235 tattgtatagaatgtatatgtttgtagcata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
