Query= MSMg01no376_p18.b1 MSMg01no376_p18.b1 CHROMAT_FILE:
MSMg01no376_p18.b1 PHD_FILE: MSMg01no376_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:01 2005
(590 letters)
>mm_chr2_112123597_112124586
Length = 990
Score = 1108 bits (573), Expect = 0.0
Identities = 579/581 (99%)
Strand = Plus / Minus
Query: 10 ctggcactatgtcaactcagaaaacaaaaggacggtttccattgttgcttaagttcaaaa 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ctggcactatgtcaactcagaaaacaaaaggacggtttccattgttgcttaagttcaaag 731
Query: 70 catatgggaaaaccttgcaagagtcagtgaaaggcttctctcctccttcaggtgaaacat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 catatgggaaaaccttgcaagagtcagtgaaaggcttctctcctccttcaggtgaaacat 671
Query: 130 ctacttagccaatatttaatgacacatcatattttataaacaacccagttttggatgccc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctacttagccaatatttaatgacacatcatattttataaacaacccagttttggatgccc 611
Query: 190 agatgcttgcaaggacattcaagaagagaactaattttatcaaaagcacaagtttaaaag 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agatgcttgcaaggacattcaagaagagaactaattttatcaaaagcacaagtttaaaag 551
Query: 250 agaaaactgtatttaaagttttaaattggtatgtaaaggaagcttcaacataactgtttt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agaaaactgtatttaaagttttaaattggtatgtaaaggaagcttcaacataactgtttt 491
Query: 310 aaagaaaaaggtatccttaaggtgcctgtagtcccataacatagtaacatactttactcc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaagaaaaaggtatccttaaggtgcctgtagtcccataacatagtaacatactttactcc 431
Query: 370 acaataacattgaatagctttatcaagtgctcagctgattaaacgggcagggagagtaaa 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acaataacattgaatagctttatcaagtgctcagctgattaaacgggcagggagagtaaa 371
Query: 430 tcaagctttatgttactttccatgttggtaccatagcaagactttgtcattagaaatgtc 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcaagctttatgttactttccatgttggtaccatagcaagactttgtcattagaaatgtc 311
Query: 490 ttctgccagacaagactcagtaaagtgtgctgactagagaatgaatgcgatcatcattca 549
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 ttctgccagacaagactcagtaaaatgtgctgactagagaatgaatgcgatcatcattca 251
Query: 550 ttcaaagcacaccacctctacagtagtcagtcctacgctgt 590
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttcaaagcacaccacctctacagtagtcagtcctacgctgt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_p18.g1 MSMg01no376_p18.g1 CHROMAT_FILE:
MSMg01no376_p18.g1 PHD_FILE: MSMg01no376_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:01 2005
(531 letters)
>mm_chr2_111983544_111984475
Length = 932
Score = 998 bits (516), Expect = 0.0
Identities = 528/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Plus
Query: 1 aagaattcaagacttttatcatctgaattagttaatgacaggcagatttgactatttcta 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aagaattcaagacttttatcatctgaattagttaatggcaggcagatttgactatttcta 260
Query: 61 gcagttttacatgtagttataattgaaaagtaagctttgtggtcaattacagaggaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagttttacatgtagttataattgaaaagtaagctttgtggtcaattacagaggaaaaa 320
Query: 121 atctaataattttagatagtacatatttttgagactagaagatgtaggttaatattgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctaataattttagatagtacatatttttgagactagaagatgtaggttaatattgcac 380
Query: 181 atatgtatatgaaaaatattacactccctctttttctagtttttttt-gcaaagaaatat 239
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 atatgtatatgaaaaatattacactccctctttttctagtttttttttgcaaagaaatat 440
Query: 240 gtgcaacctgtaagtcattataaatgtttttaaatattttctagctaaaatgtgaaaata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcaacctgtaagtcattataaatgtttttaaatattttctagctaaaatgtgaaaata 500
Query: 300 ctgatttagtagtaaactacaaaataatagtattttataaaccttgtttagaactatata 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ctgatttagtagtaaactacaaaataataatattttataaaccttgtttagaactatata 560
Query: 360 agaagaaaaatgaagaaattataatataaaaagcatgacaaactattaataaatagatgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaagaaaaatgaagaaattataatataaaaagcatgacaaactattaataaatagatgt 620
Query: 420 ataaaatgaggaagaaatggattatgcttttcatataatatattgtttactttacatata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaaatgaggaagaaatggattatgcttttcatataatatattgtttactttacatata 680
Query: 480 cttgttataattattacaaaatttagggagagtatctcccaacttatgttac 531
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgttataattaatacaaaatttagggagagtatctcccaacttatgttac 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 932
Length adjustment: 10
Effective length of query: 521
Effective length of database: 922
Effective search space: 480362
Effective search space used: 480362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
