Query= MSMg01no377_f20.b1 MSMg01no377_f20.b1 CHROMAT_FILE:
MSMg01no377_f20.b1 PHD_FILE: MSMg01no377_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:31 2005
(430 letters)
>mm_chr2_162284345_162285174
Length = 830
Score = 766 bits (396), Expect = 0.0
Identities = 420/428 (98%)
Strand = Plus / Plus
Query: 1 taagatctgtttttaactatatgctgcatctgcagttttgtaagacccatagacatgtta 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 201 taagatctgtttttaactatatgctgcatctgcagctttgtaagacccataggcatgtta 260
Query: 61 aatatcgtgttattcaaatgggacagactttccagaagctactgctaaatggtgagtggt 120
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 261 aatatcgtgttattcaaatgggacagactttctagaagctactgctaaacggtgagtggt 320
Query: 121 gagtgacagccccatctctcccaaactcagccagatctgcaggaagccactagaaatcag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgacagccccatctctcccaaacgcagccagatctgcaggaagccactagaaatcag 380
Query: 181 agcagaagtgtgcgttggtgcatcaggtaggtcctgggtctcaattactgttctaagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagaagtgtgcgttggtgcatcaggtaggtcctgggtctcaattactgttctaagatg 440
Query: 241 gccacattgatccactcaactaatgaaccttcacacaaacttcttcctcactgctgtgct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accacattgatccactcaactaatgaaccttcacacaaacttcttcctcactgctgtgct 500
Query: 301 ccccactttcttagagaactttagtgtaggatactcataaatgcaaatgctttctctgcc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 ccccactttcttagagaactttagtgtaggatacttataaatgcaaatgctttctctgcc 560
Query: 361 catttaacatgtacgacaattgcctgctctgtgactgttaatgtttggtgttaatttgac 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 catttaacatgtacgacaattgcctgctctgtgactgctaatgtttggtgttaatttgac 620
Query: 421 cacatttg 428
||||||||
Sbjct: 621 cacatttg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_f20.g1 MSMg01no377_f20.g1 CHROMAT_FILE:
MSMg01no377_f20.g1 PHD_FILE: MSMg01no377_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:31 2005
(377 letters)
>mm_chr2_162516058_162516835
Length = 778
Score = 692 bits (358), Expect = 0.0
Identities = 370/374 (98%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 1 attttgaggttccccaaacc-tgtctgtctaacactctcagagcttgtagccagagacag 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attttgaggttccccaaaccttgtctgtctaacactctcagagcttgtagccagagacag 376
Query: 60 gcaacccttggaatgggatgaatgctagcaagaagttagccctgcaaattatgaggtctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcaacccttggaatgggatgaatgctagcaagaagttagccctgcaaattatgaggtctt 316
Query: 120 tgtccatttaatttccactgttatttgagcctgtgtagaaatcaaaaccagaccagtgag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgtccatttaatttccactgttatttgagcctgtgtagaaatcaaaaccagaccagtgag 256
Query: 180 aagaagctgtcaactgaatgtcatgattaaaaacagtagctggcaagacacaaagaaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aagaagctgtcaactgaatgtcatgattaaaaacagtagctggcaagacacaaagaaaca 196
Query: 240 ttaagtgtgatcaagtaatttttctgtttagaacccttcaaagacatctcattaatttcc 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttaagtgtgatcaagtaattttcctgtttagaacccttcaaagacatctcattaatttcc 136
Query: 300 catgacccaaagacccctccccctgggtctactctcacatcggcttcactataaactaac 359
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 135 catgacccaaagacccctccccctgggtctgctctcacgtcggcttcactataaactaac 76
Query: 360 ctcatttgagatcc 373
||||||||||||||
Sbjct: 75 ctcatttgagatcc 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 778
Length adjustment: 9
Effective length of query: 368
Effective length of database: 769
Effective search space: 282992
Effective search space used: 282992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
