Query= MSMg01no377_l11.b1 MSMg01no377_l11.b1 CHROMAT_FILE:
MSMg01no377_l11.b1 PHD_FILE: MSMg01no377_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:00 2005
(464 letters)
>mm_chr2_3212862_3213725
Length = 864
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagtgaagcctgattcagactcctgtttgaggcagatcaccacatccagaaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggaattcagtgaagcctgattcagactcctgtttgaggcagatcaccacatccagaaatt 605
Query: 64 caactgtggaaatcacgttgcctcttcataaaaccgtatccaactttaagagccccacgc 123
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 604 caactgtggaaatcacgttgcctctttataaaaccgtatccaactttaagagttccacgc 545
Query: 124 ccttcttcccgagattatgcatgagagttccaaacaaattctgaagtttgctattttgag 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ccttcttcccgagattacgcatgagagttccaaacaaattctgaagtttgctattttgag 485
Query: 184 ttggaaatgggactcagggccttgtttgaacaggccactggaaccagtccactccatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttggaaatgggactcagggccttgtttgaacaggccactggaaccagtccactccatttc 425
Query: 244 tgccatggaaagatcaaatattgaacttgctacaaaggcaaattgtcagagtccatgaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgccatggaaagatcaaatattgaacttgctacaaaggcaaattgtcagagtccatgaaa 365
Query: 304 tctataggcaggatttactagaagagcctcggaaatatttcagtgcgttctggagaatgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctataggcaggatttactagaagagcctcggaaatatttcagtgcgttctggagaatgc 305
Query: 364 ccacaaaagcctaccctgcttctctctgatgtgctagctcccagcccctggcagtcagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccacaaaagcctaccctgcttctctctgatgtgctagctcccagcccctggcagtcagat 245
Query: 424 aggaccactgactgagaaaagaggcaccagtggaaatgatg 464
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggaccactgactgagaaaagaggcaccagtggaaatgatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_l11.g1 MSMg01no377_l11.g1 CHROMAT_FILE:
MSMg01no377_l11.g1 PHD_FILE: MSMg01no377_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:00 2005
(332 letters)
>mm_chr2_3051367_3052098
Length = 732
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 1 aagagggaaccaagtggtgttaataagagcatgccagggtggcatgtgggaattgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagagggaaccaagtggtgttaataagagcatgccagggtggcatgtgggaattgggagt 260
Query: 61 ggggaatggagaacctggagggcagcatggggttcacaggtcaagaattagtcatgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaatggagaacctggagggcagcatggggttcacaggtcaagaattagtcatgcaga 320
Query: 121 aaagagacaaagataccctttccatgggccactgtatcatttgtgtgatgtacatttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagacaaagataccctttccatgggccactgtatcatttgtgtgatgtacatttgaa 380
Query: 181 tggagcaggaaggtcccgacatcctgatagcctccatagccaagatggctacatttatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggagcaggaaggtcccgacatcctgatagcctccatagccaagatggctacatttatac 440
Query: 241 gtctgtgaagtattaccaaaaataaaaatagctttgagctggggggagggcagcatctag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 gtctgtgaagtattaccaaaaataaaaatagctttgagctggggggaggggagcatctag 500
Query: 301 gaaggccgctcaatgggtaagtgctgacagca 332
||||||||||||||||||||||||||||||||
Sbjct: 501 gaaggccgctcaatgggtaagtgctgacagca 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
