NTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XAC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTCTTGGAATGTTATAGGTCCTT
TGTGGTGTTTCTGTTTTGTAATAATTTTTTGGGCAGCCTCTAGTCTGTTA
AAACTATTTCCCATAACTTTTAATTTCTTAATATTAAACTTTTGTCACTC
AAAATTTCCCTTTGTTATAATGTTCTCATTTACTTCACTTTTAACATATG
GTACTGGCCTTTCCTCAGCTGCCTCAGTCACTTTGAAATAAAACAAGTAA
GTAATTTAAAAATGTAATGTGAACAGTATTTAACACAACTGAGATCCATT
TTCTGAATGAGCCAAAAAGCTGTTTGGGAAGGCAGAGAGAGTAACTTCAG
GCTGAGGTTCAATTTTAGTGTCACTTCTCTCACTGAGCAATAATGAGATG
ATACCTATAGCCTTACGTTTAATGGTGATTAAGTGACATCTTGGAACTAG
GAAACATCGGTTTATAATGGTGTAAGTAGGATTTGAATTTAATACATTTT
ATCTGCTACTAGATTAGATAAAATATTTTTATTTTCATTCCTGAAAAATT
AGTGACTAAAGTGTTAAAGTTGATCCTGTTTATTAAAAGTATGATTTGGG
GCTTGAGAGTTGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTAGAGGT
CCTGAGTTCAAATCCAGCAACCACATGGTGGCTCACAACCATCTGTAGGG
GGATC

Query= MSMg01no378_d13.g1 MSMg01no378_d13.g1 CHROMAT_FILE:
MSMg01no378_d13.g1 PHD_FILE: MSMg01no378_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:39 2005
         (583 letters)



>mm_chr2_48940575_48941558
          Length = 984

 Score = 1029 bits (532), Expect = 0.0
 Identities = 571/584 (97%), Gaps = 1/584 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttcttggaatgttataggtcctttgtggtgtttctgttttgtaataattttttgggca 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acttcttggaatgttataggtcctttgtggtgtttctgttttgtaatatttttttgggca 260

                                                                       
Query: 61  gcctctagtctgttaaaactatttcccataacttttaatttcttaatattaaacttttgt 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctctagtctgttaaaagtatttcccataacttttaatttcttaatattaaacttttgt 320

                                                                       
Query: 121 cactcaaaatttccctttgttataatgttctcatttacttcacttttaacatatggtact 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactcaaaatttctctttgttataatgttctcatttacttcacttttaacatatggtact 380

                                                                       
Query: 181 ggcctttcctcagctgcctcagtcactttgaaataaaacaagtaagtaatttaaaaatgt 240
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcctttccttagctgcctcagtcattttgaaataaaacaagtaagtaatttaaaaatgt 440

                                                                       
Query: 241 aatgtgaacagtatttaacacaactgagatccattttctgaatgagccaaaaagctgttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtgaacagtatttaacacaactgagatccattttctgaatgagccaaaaagctgttt 500

                                                                       
Query: 301 gggaaggcagagagagtaacttcaggctgaggttcaattttagtgtcacttctctcactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggaaggcagagagagtaacttcaggctgaggttcaattttagtgtcacttctctcactg 560

                                                                       
Query: 361 agcaataatgagatgatacctatagccttacgtttaatggtgattaagtgacatcttgga 420
           |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| 
Sbjct: 561 agcaataatgagatgatacctatagccttacgtttagtggtgattaaatgacatcttggg 620

                                                                       
Query: 421 actaggaaaca-tcggtttataatggtgtaagtaggatttgaatttaatacattttatct 479
           ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 actaggaaacaatcggtttataatggtgtaagtagaatttgaatttaatacattttatct 680

                                                                       
Query: 480 gctactagattagataaaatatttttattttcattcctgaaaaattagtgactaaagtgt 539
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 gctactagattagataaaatatttttattttcattcctgaaaaattagtgactaaactgt 740

                                                       
Query: 540 taaagttgatcctgtttattaaaagtatgatttggggcttgaga 583
           ||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 741 taaagttgatcctgtataataaaagtatgatttggggcttgaga 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space:   558102
Effective search space used:   558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)