NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGCAATATAACTAAGATAAAAGGTCACAAACTAACCCAATG
GGTGAAAACACAATCAAATCTTGCCTGTGTATTTATAGTCCTTAGACTTT
CCTCTGAGTCTGGTGCACCACTTAACTCTGTTAAAATGATTAGTGCTTAC
CCCAACACACGTGGGCAAGGGAACTGTCAGTGATTCAGTTCTGGCCCTTG
GCCTTTAAATGCCTTTGCTCACCTCAAAAAGCCTTTGGTCTGCATCATCA
AAAGGTTTCCCGTCGAGTCTGTTCAACACTTGAGCCACCCCTGTTGAGGG
AAGGTGGGGACAGTGGTCATTGTCAGTACTGGCATCCTGTCCCTGTGACA
GAGTGTGCCATAGTTGATTCTGTGGGTGGCTTAGCACACTCAGTTTAATC
TCTGATGCAATCGCAGTTTTATATATAATCATTGGATACACACACACACA
CATATATATATATGGATACACACACATATATATATGGATACACACACATA
TATATATGGATATACACACACACATATATATATATGGATACACACACACA
TATATATGGATATACATACACACACATACACACACACACACACACACACA
TACACACATCCTCTTCCTCCTTGGTGTTTGGGACAGCCAATGTGGCATGT
GGATTAAAAAACCAACTTCTGGCTTTTAAAAACCTTATTCCAATTCCCCT
TCTAGGGGTTACTGGTGG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGC
TGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAA
ATCAAAAATTTAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCTTCCATTGTTGGTGGGATTGCAAGATTGTACAACCACTCTGGA
AGTCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCCACAATACCTCTCCTGGGCATATATCCAGTAGATGTTCCAACCGGTAT
GAAGGATACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAN
ATGTGGTATATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACCCAATCACAAAAGAATTCACACAGTATGTACTCAATGATA
AGTGGTATTAGCCCACAAACTTTAGATAACCCAGATATCTAAATACATTT
GCTAAACCATGGAACCTCAGAAGAACAAAAAACCAAGTGGGGGAACCTTT
GCCCTTCTTTAAAATGGGAAA

Query= MSMg01no378_f19.b1 MSMg01no378_f19.b1 CHROMAT_FILE:
MSMg01no378_f19.b1 PHD_FILE: MSMg01no378_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:50 2005
         (544 letters)



>mm_chr2_75974973_75975916
          Length = 944

 Score =  895 bits (463), Expect = 0.0
 Identities = 526/559 (94%), Gaps = 20/559 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgcaatataactaagataaaaggtcacaaactaacccaatgggtgaaaacaca 63
           ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaaaataaaactaagataaaaggtcacaaactaacccaatgggtgaaaacaca 263

                                                                       
Query: 64  atcaaatcttgcctgtgtatttatagtccttagactttcctctgagtctggtgcaccact 123
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 atcaaatcttgcctgtgtagttatagtccttagactttcctctgagtctggtgcaccatt 323

                                                                       
Query: 124 taactctgttaaaatgattagtgcttaccccaacacacgtgggcaagggaactgtcagtg 183
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 taactctgttaaaatgattagtgtttaccccaacacacgtgggcaagggaactgtcagtg 383

                                                                       
Query: 184 attcagttctggcccttggcctttaaatgcctttgctcacctcaaaaagcctttggtctg 243
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attcagttctggctcttggcctttaaatgcctttgctcacctcaaaaagcctttggtctg 443

                                                                       
Query: 244 catcatcaaaaggtttcccgtcgagtctgttcaacacttgagccacccctgttgagggaa 303
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catcatcaaaaggttttccgtcgagtctgttcaacacttgagccacccctgttgagggaa 503

                                                                       
Query: 304 ggtggggacagtggtcattgtcagtactggcatcctgtccctgtgacagagtgtgccata 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtggggacagtggtcattgtcagtactggcatcctgtccctgtgacagagtgtgccata 563

                                                                       
Query: 364 gttgattctgtgggtggcttagcacactcagtttaatctctgatgcaatcgcagttttat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttgattctgtgggtggcttagcacactcagtttaatctctgatgcaatcgcagttttat 623

                                                                       
Query: 424 atataatcattggatacacacacacacacatata------------------tatatatg 465
           |||| ||||||||||||||||||||||||| | |                  ||||||||
Sbjct: 624 atatgatcattggatacacacacacacacacacacacacacacacacacacatatatatg 683

                                                                       
Query: 466 gatacacacacatatatatatggatacacacacatatatatatggatatacacacacaca 525
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 684 gatacacacacatatatatatggatacacacacacatatatatggatatacacacacaca 743

                              
Query: 526 tatatatatatggatacac 544
            ||||||||  ||||||||
Sbjct: 744 catatatat--ggatacac 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)