Query= MSMg01no378_i04.b1 MSMg01no378_i04.b1 CHROMAT_FILE:
MSMg01no378_i04.b1 PHD_FILE: MSMg01no378_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:01 2005
(570 letters)
>mm_chr2_109512633_109513602
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcaacagttacgagaacttactaacagcatgatgaattgcattctcaggaaac 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcaacaggcaagagaacttactaacagcatgatgaattgcattctcaggaaac 264
Query: 65 tggcttttctcacataacctgtaccccaagacctctgaagatggcttatgccagctgtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggcttttctcacataacctgtaccccaagacctctgaagatggcttatgccagctgtct 324
Query: 125 tagtcttagggcagcatctgctggctaattcatggatggacaaaaagtgacaatttatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagtcttagggcagcatctgctggctaattcatggatggacaaaaagtgacaatttatga 384
Query: 185 acaatatgaacagtgttgtttcttttttatttgatttttgttttttgtttttagctggag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaatatgaacagtgttgtttcttttttatttgatttttgttttttgtttttagctggag 444
Query: 245 gtaactgttgccttggtgactgtaactggtggatggtattctctaagtgatgatgcacac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaactgttgccttggtgactgtaactggtggatggtattctctaagtgatgatgcacac 504
Query: 305 caggtcaccaagagcctctaagaggtaaagaaagcctttgtacaaatatatgttggctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caggtcaccaagagcctctaagaggtaaagaaagcctttgtacaaatatatgttggctgg 564
Query: 365 agcctagaatgatctgggttgactttgaaaacatctctttaggggtgcatatgaatgcgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agcctagaatgatctgggttgactttgaaaacatctctttaggggtgcatatgaatgcgc 624
Query: 425 aacactggatttactgctaatactaataatctagtaccaatggagggtccaagaacagaa 484
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 aacactggatttactgctaatactaataatctagtaccaatggagagtccaagaacagaa 684
Query: 485 cttcacagaaggcattaaggaagtaacgcttaggtttctttaaagaagcattcttaggat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttcacagaaggcattaaggaagtaacgcttaggtttctttaaagaagcattcttaggat 744
Query: 545 aggagggggaggggacctgaaccttg 570
||||||||||||||||||||||||||
Sbjct: 745 aggagggggaggggacctgaaccttg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_i04.g1 MSMg01no378_i04.g1 CHROMAT_FILE:
MSMg01no378_i04.g1 PHD_FILE: MSMg01no378_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:01 2005
(555 letters)
>mm_chr2_109688262_109689216
Length = 955
Score = 468 bits (242), Expect = e-136
Identities = 294/326 (90%), Gaps = 27/326 (8%)
Strand = Plus / Minus
Query: 1 agttactatttccttgaaagtaagatgcttgtgtatatctgtaagcacaaaaatatgccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agttactatttccttgaaagtaagatgcttgtgtatatctgtaagcacaaaaatatgccc 244
Query: 61 agtggtcctcaggtctgaccacactgtaaaatcaactacagaacagcagcagcagtagca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 243 agtggtcctaaggtctgaccacactgtaaaatcaactacagaacagcagcagcagcagca 184
Query: 121 ctagtaggagcagcagcagcagcagcagcagtaataggagcagcacatcct--gttttcc 178
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 183 gtagtaggagcagcagcagcagcagcag---taataggagcagcacatcctatgttttcc 127
Query: 179 ttactcgagaggacttaagttgaaactccagaagtattttattcagttgattctacaaga 238
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttactccagaggacttaagttgaaactccagaagtattttattcagttgattctacaaga 67
Query: 239 attgaagatttaaaaagacagacagacagacagacagacagacacacacacacacacaca 298
||||||||||| || ||| ||| ||||||||||||||||||
Sbjct: 66 attgaagattt-----ga---acacaca--------------cacacacacacacacaca 29
Query: 299 cacagagagagagagagagagagaga 324
||||||||||||||||||||||||||
Sbjct: 28 cacagagagagagagagagagagaga 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
