Query= MSMg01no379_e20.b1 MSMg01no379_e20.b1 CHROMAT_FILE:
MSMg01no379_e20.b1 PHD_FILE: MSMg01no379_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:02 2005
(499 letters)
>mm_chr2_70212436_70213339
Length = 904
Score = 783 bits (405), Expect = 0.0
Identities = 426/435 (97%), Gaps = 5/435 (1%)
Strand = Plus / Minus
Query: 70 tgctcagtttgctttcttatagaacctaggactaccagccaagggaatggaaccacccac 129
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 904 tgctcagtttgctttcttatagaacccaggactaccagccaagggaatggaaccacccac 845
Query: 130 aaggggcctttccccccttgatcactaagtgagagaatgtcttacagctggatcttatgg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 844 aaggggcctttccccccttgatcactaagtgagagaatgtcttacagctggatctcatgg 785
Query: 190 aggcatttcctcaagggaggctcctttctctgtgataactccagcttgtgtcaagttgac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aggcatttcctcaagggaggctcctttctctgtgataactccagcttgtgtcaagttgac 725
Query: 250 tcacaaaaccagccagcacactgtaatttcaacattcttttgttagatacatggcctact 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcacaaaaccagccagcacactgtaatttcaacattcttttgttagatacatggcctact 665
Query: 310 ggtttgttttcacttggaaatgccataaaatacctttatgaataaatatttgactatgtc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggtttgttttcacttggaaatgccataaaatacctttatgaataaatatttgactatgtc 605
Query: 370 tttgattatttctaaagattgtattcctagaagtgagatgacttggaaagatactttaaa 429
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 604 tttgattatttctaaagattgtattcctagaagtgagatgacttggaaagatacttcaaa 545
Query: 430 tatgtcctaatagt----atacttattgtcttgggtgagtaagagcacccataggctacc 485
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tatgtcccaatagttagtatacttattgtcttgggtgagtaagagcacccataggctacc 485
Query: 486 tgttacttgt-ggag 499
|||||||||| ||||
Sbjct: 484 tgttacttgttggag 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 904
Length adjustment: 10
Effective length of query: 489
Effective length of database: 894
Effective search space: 437166
Effective search space used: 437166
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_e20.g1 MSMg01no379_e20.g1 CHROMAT_FILE:
MSMg01no379_e20.g1 PHD_FILE: MSMg01no379_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:02 2005
(277 letters)
>mm_chr2_70029193_70029870
Length = 678
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 1 taaacatgcttgaccccaaaggagtttgtatgagagtctgagtttgtatttcatttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaacatgcttgaccccaaaggagtttgtatgagagtctgagtttgtatttcatttccat 260
Query: 61 ttcaaatgcaacggagctcagggtcctgaaaattgtttgtttgtctaatccctcctggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaatgcaacggagctcagggtcctgaaaattgtttgtttgtctaatccctcctggac 320
Query: 121 ccatgtcatgtccttctgtacagaagagtggggaggtgggaggatgagactcagagaatg 180
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ccatgtcatgtccttccgtacagaagagtggggaggtgggaggatgggactcagagaatg 380
Query: 181 ctaccaagagacatggtgttggaaggtgactgcgaagttagggtcaagggaagactcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaccaagagacatggtgttggaaggtgactgcgaagttagggtcaagggaagactcaga 440
Query: 241 gaatgctaacaagagag-gtagtgctggagagtgaagt 277
||||||||||||||||| | ||||||||||||||||||
Sbjct: 441 gaatgctaacaagagagtgaagtgctggagagtgaagt 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
