TCATXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCGGA
ATTCCACCATTACCTCAATGGCTCATTTCTCTTTATGAAGTGAAGGCCCC
CAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACC
CTATAGGTGGAACAACAATATGAACTACCCAGTACTTCCCAGAGCTTGTG
TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAA
AGAGAGGCCCATTGGTTGTGCAAACTTTATCTGCCTCAGTACAGGGGAAC
GCCAGGGCCAAGAATAAGTAGNGGGTGGGTGGGGGAGTGGNNNNNNNNNN
NNNNTTTTTTCTCCCCCCCCCCTTTTTCTTTTTTTTCCTTTCTCTCCCCT
CCTTCTCCCCCCCCCCTCCTTTTTTTTTTTTTCTCTTTCTCTCCTTCCCC
CCCTCCCCTCTTTTCTTTTTCTTTTCCCCCCCCCCCTTTCCTCCTTCTCT
TCTCCTTTTCCTCCTTCTTTTTTTTTTCTTCTTTTCCTTTCTTTCCTCCC
TTTTCCCCCTTCCCTTTCTTTCTTTCTTTTCTTTTCCTCCTCCCTTCTTT
TTTCCTCTTTTTTTCCCCCCCCCTCTTTCCTTTTTTTTTTTTTCTTTCCT
TTCCTNTTCCCCCTTTTTCCTTTTTCCCCTCCCTTCTCTCCTTCCTTTTC
TTTCCCCCCCCCCTTN

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTCATTTCTTTTCAACAGGGATAAAAGA
TGCAGAGACTGGGGTGGGGGTAGAGAATAGATGTAAGCTGTGCAAGGTCT
CACTGTGTATAGGCACGTGGCTGAGATAAATGTAGTTTTGCATCTACATA
GAATACTCTCCTGGTAAAGAAATTAGAAATTCTGGCTGTCTTCATGAAAT
TCATCATGAGGGAATACACTCAGAATTCGAAGTCCTGACTTTAGGAGAGA
CATGGGAGCCAGTGAACTGCAGCTCCAAAGAGGACCTTCTCTGATATGGG
CAGACACATGTCAGAGCTCATTATCTGGATGTGATCTGCTCAACTTTTGC
TCCCTAGTGTGTCTATTTGGGCAAACTCAAGATAGTATTGTTAAAAACAA
AACAAAACAACAAAAAAAAAACTTAATGCAAAAATCCCCAGAGAGAAAGG
GTTAACTTCTTCCCTGTCCCTTTTTCTTTTCCCAAAGTCTAAACAGTGTG
TTTTCCCCCCTCTCTTTCCTTAAGTGATAAATTTGAGTCTGAAACACAAA
GTGGAGACCATTATGCAGAAAGTGCCTATTTTCTTCTGATGGTTGATAGG
AATTAGGATTAGCAGAACCCCAACTCTTGGTTTTCCCTTTCCACAGCTTG
TCATTTTTTGCAAACAGAAACTGATTAG

Query= MSMg01no379_n11.g1 MSMg01no379_n11.g1 CHROMAT_FILE:
MSMg01no379_n11.g1 PHD_FILE: MSMg01no379_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:42 2005
         (523 letters)



>mm_chr2_159535806_159536723
          Length = 918

 Score =  909 bits (470), Expect = 0.0
 Identities = 508/524 (96%), Gaps = 7/524 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcatttcttttc-aacagggataaaagatgcagagactggggtgggggtagagaatag 59
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tttcatttcttttcaaacagggataaaagatgcagagactggggtgggggtagagaatag 659

                                                                       
Query: 60  atgtaagctgtgcaaggtctcactgtgtataggcacgtggctgagataaatgtagttttg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atgtaagctgtgcaaggtctcactgtgtataggcacgtggctgagataaatgtagttttg 599

                                                                       
Query: 120 catctacatagaatactctcctggtaaagaaattagaaattctggctgtcttcatgaaat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 catctacatagaatactctcctggtaaagaaattagaaattctggctgtcttcatgaaat 539

                                                                       
Query: 180 tcatcatgagggaatacactcagaattcgaagtcctgactttaggagagacatgggagcc 239
           |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 538 tcatcatgagggaatacactcagaattcgaagtcctgactttgggagggacatgggagcc 479

                                                                       
Query: 240 agtgaactgcagctccaaagaggaccttctctgatatgggcagacacatgtcagagctca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtgaactgcagctccaaagaggaccttctctgatatgggcagacacatgtcagagctca 419

                                                                       
Query: 300 ttatctggatgtgatctgctcaacttttgctccctagtgtgtctatttgggcaaactcaa 359
           ||||||||||||||||||| |||||||| ||  ||||||| |||||||||||||||||||
Sbjct: 418 ttatctggatgtgatctgcccaacttttactatctagtgtctctatttgggcaaactcaa 359

                                                                       
Query: 360 gatagtattgttaaaaacaaaacaaaacaacaaaaaaaaaacttaatgcaaaaatcccca 419
           ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||
Sbjct: 358 gatagtattgttaaaaacaaaacaaaacaa------aaaaacttaatgcaaaaatcccca 305

                                                                       
Query: 420 gagagaaagggttaacttcttccctgtccctttttcttttcccaaagtctaaacagtgtg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagagaaagggttaacttcttccctgtccctttttcttttcccaaagtctaaacagtgtg 245

                                                       
Query: 480 ttttcccccctctctttccttaagtgataaatttgagtctgaaa 523
           |||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 244 ttttcccccctctctttttttaagtgataaatttgagtctgaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 918
Length adjustment: 10
Effective length of query: 513
Effective length of database: 908
Effective search space:   465804
Effective search space used:   465804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)