MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-379N23
Chromosome	2 (Build37)
Map Location	144,779,040 - 144,779,298
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
Downstream gene	Slc24a3, LOC627312, OTTMUSG00000015643, LOC433482, LOC100043810, Rin2, Nat5, Crnkl1, 4930529M08Rik, LOC100043563
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rrbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81910 MGI:1932395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930517K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403171 MGI:2684961
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC627160 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 2472 ESTs, 6 Proteins pseudo : _no_value

name	EG433481 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433481 MGI:3645019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Snx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69178 MGI:1916428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8430406I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74528 MGI:1921778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ovol2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107586 MGI:1338039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ppia-ps2_1789.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606731
definition	note : peptidylprolyl isomerase A pseudogene 2_1789.1 pseudo : _no_value

name	LOC635097 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs, 2 Proteins pseudo : _no_value

name	Csrp2bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228714 MGI:1917264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043552 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043552
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	6330439K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241688 MGI:2139080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr3f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70408 MGI:1924086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26450 MGI:1347074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec23b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27054 MGI:1350925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm561 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228715 MGI:2685407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dtd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66044 MGI:1913294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010M22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66328 MGI:1913578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc24a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94249 MGI:2137513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627312 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs, 6 Proteins

name	OTTMUSG00000015643 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627302 MGI:3651965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100043810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	Rin2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74030 MGI:1921280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nat5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67877 MGI:1915127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crnkl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66877 MGI:1914127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930529M08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78774 MGI:1926024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043563 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Rrbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486711 GeneID:81910 MGI:1932395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosome binding protein 1 transcript_id : NM_024281.2

name	Rrbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486725 GeneID:81910 MGI:1932395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosome binding protein 1 transcript_id : NM_133626.2

name	4930517K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113679810 GeneID:403171 MGI:2684961
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930517K23 gene transcript_id : NM_001044750.1

name	4930517K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402306 GeneID:403171 MGI:2684961
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930517K23 gene transcript_id : NM_207275.1

name	Snx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345042 GeneID:69178 MGI:1916428
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 5 transcript_id : NM_024225.3

name	8430406I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358848 GeneID:74528 MGI:1921778
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430406I07 gene transcript_id : NM_028984.3

name	Ovol2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130293 GeneID:107586 MGI:1338039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovo-like 2 (Drosophila) transcript_id : NM_026924.3

name	Ovol2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23308706 GeneID:107586 MGI:1338039
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovo-like 2 (Drosophila) transcript_id : NM_152947.1

name	Csrp2bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340880 GeneID:228714 MGI:1917264
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and glycine-rich protein 2 binding protein transcript_id : NM_181417.2

name	6330439K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378023 GeneID:241688 MGI:2139080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330439K17 gene transcript_id : NM_172859.2

name	Polr3f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887770 GeneID:70408 MGI:1924086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) III (DNA directed) polypeptide F transcript_id : NM_029763.3

name	Rbbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86439976 GeneID:26450 MGI:1347074
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma binding protein 9 transcript_id : NM_015754.2

name	Sec23b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130653 GeneID:27054 MGI:1350925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC23B (S. cerevisiae) transcript_id : NM_019787.3

name	Gm561 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802860 GeneID:228715 MGI:2685407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 561, (NCBI) transcript_id : NM_001033297.2

name	Dtd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891717 GeneID:66044 MGI:1913294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) transcript_id : NM_025314.2

name	1700010M22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988384 GeneID:66328 MGI:1913578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700010M22 gene transcript_id : NM_025490.2

name	Slc24a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131150 GeneID:94249 MGI:2137513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 transcript_id : NM_053195.2

name	LOC627312 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250181 GeneID:627312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 61 ESTs, 6 Proteins product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) transcript_id : XM_894997.3

name	OTTMUSG00000015643 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353741 GeneID:627302 MGI:3651965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000015643 transcript_id : NM_001037929.2

name	LOC433482 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250035 GeneID:433482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical gene supported by BC028556 transcript_id : XM_001004714.2

name	LOC100043810 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250183 GeneID:100043810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : hypothetical protein LOC100043810 transcript_id : XM_001481068.1

name	Rin2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802329 GeneID:74030 MGI:1921280
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras and Rab interactor 2 transcript_id : NM_028724.3

name	Nat5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348913 GeneID:67877 MGI:1915127
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) transcript_id : NM_026425.2

name	Crnkl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388922 GeneID:66877 MGI:1914127
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Crn, crooked neck-like 1 (Drosophila) transcript_id : NM_025820.2

name	4930529M08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110630011 GeneID:78774 MGI:1926024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930529M08 gene transcript_id : NM_175280.3

name	Rrbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486712 GeneID:81910 MGI:1932395
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : ribosome binding protein 1 isoform a protein_id : NP_077243.2

name	Rrbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19482168 GeneID:81910 MGI:1932395
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : ribosome binding protein 1 isoform b protein_id : NP_598329.1

name	4930517K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113679811 GeneID:403171 MGI:2684961
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens Chromosome 20 open reading frame 179 (C20orf179) product : barrier-to-autointegration factor-like protein_id : NP_001038215.1

name	4930517K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402307 CCDS:CCDS16813.1 GeneID:403171 MGI:2684961
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens Chromosome 20 open reading frame 179 (C20orf179) product : barrier-to-autointegration factor-like protein_id : NP_997158.1

name	Snx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18034769 CCDS:CCDS16815.1 GeneID:69178 MGI:1916428
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : snoRNA MBI-43 product : sorting nexin 5 protein_id : NP_077187.1

name	8430406I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312780 CCDS:CCDS16816.1 GeneID:74528 MGI:1921778
definition	codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 72 (C20orf72) product : hypothetical protein LOC74528 protein_id : NP_083260.1

name	Ovol2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308705 CCDS:CCDS16817.1 GeneID:107586 MGI:1338039
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048558 - embryonic gut morphogenesis [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001842 - neural fold formation [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant A; zinc finger OVO2; zinc finger protein 339; MOVO-B zinc finger protein; MOVO-C zinc finger protein; OVO homolog-like 2 product : ovo-like 2 isoform A protein_id : NP_081200.2

name	Ovol2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308707 CCDS:CCDS16818.1 GeneID:107586 MGI:1338039
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0048558 - embryonic gut morphogenesis [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001842 - neural fold formation [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform B is encoded by transcript variant B; zinc finger OVO2; zinc finger protein 339; MOVO-B zinc finger protein; MOVO-C zinc finger protein; OVO homolog-like 2 product : ovo-like 2 isoform B protein_id : NP_694455.1

name	Csrp2bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088884 CCDS:CCDS16819.1 GeneID:228714 MGI:1917264
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008080 - N-acetyltransferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : cysteine-rich protein 2 binding protein product : cysteine and glycine-rich protein 2 binding protein protein_id : NP_852082.1

name	6330439K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378024 GeneID:241688 MGI:2139080
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 12 (C20orf12) product : hypothetical protein LOC241688 protein_id : NP_766447.2

name	Polr3f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754160 CCDS:CCDS16820.1 GeneID:70408 MGI:1924086
definition	GO_component : GO:0005666 - DNA-directed RNA polymerase III complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence ISS] [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006359 - regulation of transcription from RNA polymerase III promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : polymerase (RNA) III (DNA directed) polypeptide F protein_id : NP_084039.2

name	Rbbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86439977 CCDS:CCDS16821.1 GeneID:26450 MGI:1347074
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : retinoblastoma-binding protein 9 product : retinoblastoma binding protein 9 protein_id : NP_056569.2

name	Sec23b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980969 CCDS:CCDS16822.1 GeneID:27054 MGI:1350925
definition	GO_component : GO:0030127 - COPII vesicle coat [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0048471 - perinuclear region [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SEC23B protein_id : NP_062761.2

name	Gm561 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701806 CCDS:CCDS16823.1 GeneID:228715 MGI:2685407
definition	codon_start : 1 product : hypothetical protein LOC228715 protein_id : NP_001028469.1

name	Dtd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384676 CCDS:CCDS16824.1 GeneID:66044 MGI:1913294
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0019478 - D-amino acid catabolism [Evidence IEA] codon_start : 1 product : D-tyrosyl-tRNA deacylase 1 protein_id : NP_079590.1

name	1700010M22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988385 GeneID:66328 MGI:1913578
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005498 - sterol carrier activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 20 open reading frame 79 (C20orf79) product : hypothetical protein LOC66328 protein_id : NP_079766.3

name	Slc24a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956242 GeneID:94249 MGI:2137513
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008273 - calcium, potassium:sodium antiporter activity [Evidence IDA] [Evidence ISS]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence TAS]; GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 protein_id : NP_444425.1

name	LOC627312 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250182 GeneID:627312
definition	codon_start : 1 product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) protein_id : XP_900090.2

name	OTTMUSG00000015643 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702320 GeneID:627302 MGI:3651965
definition	codon_start : 1 product : hypothetical protein LOC627302 protein_id : NP_001033018.1

name	LOC433482 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250036 GeneID:433482
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001004714.2

name	LOC100043810 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250184 GeneID:100043810
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481118.1

name	Rin2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181298 GeneID:74030 MGI:1921280
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Ras and Rab interactor 2 protein_id : NP_083000.4

name	Nat5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385922 CCDS:CCDS16827.1 GeneID:67877 MGI:1915127
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) protein_id : NP_080701.1

name	Crnkl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385288 CCDS:CCDS16828.1 GeneID:66877 MGI:1914127
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 product : crooked neck-like 1 protein protein_id : NP_080096.1

name	4930529M08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110630012 GeneID:78774 MGI:1926024
definition	codon_start : 1 product : hypothetical protein LOC78774 protein_id : NP_780489.2

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 1 pseudo : _no_value

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 2 pseudo : _no_value

name	LOC100043552 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043552
definition	number : 3 pseudo : _no_value

name	LOC100043563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043563
definition	number : 1 pseudo : _no_value

name	LOC100043563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043563
definition	number : 2 pseudo : _no_value

name	LOC627160 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250179 GeneID:627160
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 mRNAs, 2472 ESTs, 6 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_034961.1

name	EG433481 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250180 GeneID:433481 MGI:3645019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG433481 transcript_id : XR_035472.1

name	LOC635097 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250030 GeneID:635097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs, 2 Proteins product : similar to nuclear domain 10 protein 52 like 1 pseudo : _no_value transcript_id : XR_034670.1

clone name	MSMg01-476M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-379N23.T7 (MSMg01no379_n23.b1)	MSMg01-379N23.TJ (MSMg01no379_n23.g1)
ACC	AG484381	AG484382
length	831	786
length of high quality (start - end)	267 (41 - 307)	390 (69 - 458)
definition	CHROMAT_FILE: MSMg01no379_n23.b1 PHD_FILE: MSMg01no379_n23.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:20:44 2005	CHROMAT_FILE: MSMg01no379_n23.g1 PHD_FILE: MSMg01no379_n23.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:20:44 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC TATCCAAATTCCAGTCTGAAAGTCTTGATGTTCCTTCTGTTCTTTAGTTC TTCAATGTTATTACCCACTGCTTTCCTCCTTGTATGGTTTTTGACAAAAA GTTGTAATTTTTTTTATTTCTTCTTTCCTTCTTTTCTCTGCCTCCAAGGT ATCATTTTTCAGCCTAAACAGTTCTCTCTGTTTGTGCATGTCTGAGTGGA TCTGTGGTCATGTATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTTTTANATTATNNTTTTTATTTTTTNTNNNNNTTTTTGTNNNNTTTTT TTTTNTTTTTTTTTNTTTTTTTTNTTTTTTTTTTTTNTTTTTTTTTTTTT TTTTTTTTNTTTAATTTTTNTTTTTTTNTTTTTTTNNTTTTNNNTTTTTT TTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNTTTTTTTT TTTTTTTTTNTTTTTTTNNTTNTTTTTTTTTTTNNTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTNTTTTTTTTTNTTTTTTNTTTTTTTTNTAANT TTTTTTTTTNTTTTTTTTTTTTTNNTTTTNTTTTTNTTTTNTTTTTTTTT TTTTTTTTTTNTTTTTTTTNTTTTTTTTNNTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTNTTTTTTTTTNTNNTTNNTTTTNTTCTTTTTTNNTTTTTT TTTNTTTTTTCTTTTTTTCTCTCTTCTTTTT	ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGG TGTTGGATCTTGTTAAATGCTTTTTCTGCATCTAACGAGATGATCATGTG GTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTC GTATATTAAACCATCCCTGTATCCCTGGAATAAAGCCTACTTGGTCAGGA TGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATT GAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTA TCTTTGTTGGGTCTTTCTGTGGTTTAGATATCAGAGTAATAGTGGCTTCA TAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTT GTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCAC TAAACTCATCTGGTCCTAGGCTTTTTTTGGTTTGGGAGACTATTAATAAA TGCTTCTATTTCTTTAAGGGAAAATGGACTGTTTAAAGGGTCACTTTGAT CTCGATCCACTTTGGTACCTTGGATATGCCCCAAAATTTTCCTTTTTTCC CAGTTTTTTCAGTTTTTTGAGAAAAACCTTTTGCAAAAAACCCATTAGCT TTTTGCTTTTTCTATATCCTGTGCATTTCCCTCTTACTTCTTGCCTTTTC TTTTCCCCCCTTTTTCACTCACCTCCCGTTCTCTTG
quality values	Open. Hide. 24 24 26 26 35 30 22 22 18 18 12 15 11 11 11 18 18 34 34 37 22 17 28 20 20 21 21 11 11 11 16 16 13 13 15 15 15 15 16 21 23 59 47 47 30 30 28 28 36 36 48 50 33 33 26 26 15 16 22 15 8 8 8 13 19 39 39 39 37 28 37 37 37 37 37 37 33 33 33 36 36 38 53 59 59 59 57 57 59 59 59 59 59 59 59 59 59 57 68 68 51 51 42 42 42 51 59 68 68 68 68 68 68 68 68 68 68 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 68 68 68 68 68 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 46 47 41 23 23 3 0 3 22 22 20 3 0 0 3 8 6 10 9 6 9 10 8 8 8 3 0 3 0 0 0 0 0 3 10 10 9 8 8 3 0 0 0 0 3 8 8 8 7 9 7 7 3 0 3 9 15 9 9 6 6 8 3 0 3 9 7 7 6 6 8 3 0 3 9 8 8 6 6 6 6 6 6 8 3 0 3 6 6 6 6 7 10 11 9 10 8 10 8 8 8 11 14 12 11 11 3 0 3 9 9 6 8 8 8 9 9 3 0 3 6 6 6 6 6 3 0 3 7 6 8 6 7 3 0 0 3 6 6 3 0 0 0 3 9 9 9 9 7 7 8 3 0 0 3 6 6 8 8 8 18 12 12 11 19 14 11 11 9 9 8 8 10 13 19 22 13 12 12 12 12 9 9 3 0 3 11 9 9 9 10 9 7 7 7 7 8 8 13 12 12 10 10 6 6 6 7 7 8 9 9 9 8 11 13 9 10 10 6 6 6 7 7 6 6 6 6 6 6 10 13 10 8 10 8 8 7 3 0 0 0 3 6 6 9 12 8 9 10 10 8 8 10 7 7 7 9 3 0 3 10 9 15 13 22 3 0 0 3 3 0 3 10 10 8 8 8 8 8 7 9 3 0 0 3 8 8 9 9 9 9 9 10 10 10 12 9 8 8 9 10 10 10 17 9 9 9 9 14 20 24 15 9 6 6 6 3 0 3 8 8 10 11 10 8 11 3 0 3 10 9 6 6 3 0 3 6 6 6 8 9 9 3 0 3 6 3 0 3 9 7 8 8 8 8 6 6 3 0 3 8 8 6 6 6 6 7 9 7 6 7 3 0 0 3 6 11 3 0 3 15 11 11 3 0 3 9 12 3 0 3 12 12 12 11 11 11 9 7 7 9 6 6 6 6 6 6 6 3 0 3 7 6 8 7 7 7 3 0 3 6 8 8 8 8 8 3 0 0 3 7 6 6 6 7 7 6 6 6 9 9 9 9 9 10 9 6 6 7 6 6 6 8 9 11 11 8 10 3 0 3 7 17 11 9 9 7 8 3 0 3 0 0 3 3 0 0 3 6 6 3 0 3 8 9 16 13 15 13 12 3 0 0 3 6 6 9 6 6 6 6 3 0 3 7 7 8 8 8 6 6 6 6 6 8 10 11 10 15 8 10 8 8 8 8 13 11 7 7 7	Open. Hide. 6 6 8 19 19 9 9 11 16 21 29 27 32 37 37 32 32 37 29 31 41 37 37 27 27 11 9 9 11 12 11 10 10 11 17 21 34 41 37 37 34 37 37 37 37 37 39 48 48 48 48 41 28 18 15 23 23 33 32 30 30 40 37 42 37 37 42 42 68 68 68 68 68 68 68 68 39 39 20 20 20 42 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 59 59 59 59 59 54 54 57 59 59 59 57 57 57 57 68 68 68 68 44 44 35 35 35 47 47 59 57 59 57 54 54 54 48 54 57 59 48 43 43 43 39 39 35 42 42 48 57 57 57 48 48 48 48 48 48 48 48 48 43 43 40 40 40 41 39 30 30 24 30 25 25 27 28 30 21 25 19 22 16 16 17 22 22 24 22 22 19 19 11 12 10 18 18 29 25 32 35 37 34 33 25 19 17 15 15 15 22 22 15 15 10 11 11 12 15 16 22 20 11 11 11 21 12 12 12 12 12 12 16 12 12 18 16 17 11 12 11 17 10 8 8 8 11 9 21 21 21 23 32 24 13 9 9 9 10 11 11 12 11 12 12 14 12 12 13 11 11 9 9 8 8 8 10 9 9 9 8 12 10 16 10 9 9 10 8 9 9 9 10 13 16 16 17 8 8 8 8 8 8 8 10 10 10 14 15 14 10 10 10 9 7 6 6 6 8 10 13 14 15 11 9 8 8 10 8 8 8 8 8 8 8 8 10 15 16 13 20 18 12 10 10 10 10 8 6 8 6 6 8 7 8 8 8 9 9 9 10 10 10 12 13 10 10 9 13 14 12 14 12 20 19 14 12 11 11 11 13 17 9 10 10 8 8 10 10 15 13 15 11 12 12 9 10 10 10 8 8 8 8 8 8 15 15 8 8 8 8 9 11 11 15 16 13 12 12 9 9 9 9 9 9 11 16 13 10 9 9 9 10 9 8 8 6 6 8 8 8 8 10 12 10 9 8 8 8 8 8 8 8 8 12 15 15 11 8 8 6 6 6 11 8 8 12 8 9 10 10 10 13 9 15 16 14 20 28 26 19 17 18 15 15 22 21 29 19 26 13 8 8 8 8 8 8 8 10 12 12 11 11 11 12 12 8 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no379_n23.b1 MSMg01no379_n23.b1 CHROMAT_FILE:
MSMg01no379_n23.b1 PHD_FILE: MSMg01no379_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:44 2005
         (267 letters)



>mm_chr2_144778836_144779502
          Length = 667

 Score =  462 bits (239), Expect = e-135
 Identities = 254/259 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatccaaattccagtctgaaagtcttgatgttccttctgttctttagttcttca 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatccaaattcaagtctgaaagtcttgatgttccttctgttctttagttcttca 264

                                                                       
Query: 65  atgttattacccactgctttcctccttgtatggtttttgacaaaaagttgtaattttttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 atgttattacccactgctttcctccttgtatggtttttgacaaaaagttgtaattatttt 324

                                                                       
Query: 125 tatttcttctttccttcttttctctgcctccaaggtatcatttttcagcctaaacagttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttcttctttccttcttttctctgcctccaaggtatcatttttcagcctaaacagttc 384

                                                                       
Query: 185 tctctgtttgtgcatgtctgagtggatctgtggtcatgtatatttgtgtgtgtgtgtgtg 244
           |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 385 tctctgtttgtgcatgtcggagtggatctgtggtaatgtatatttgtgtgtttgtgtgtg 444

                              
Query: 245 tgtgtgtgtgtgtgtgtgt 263
           |||||||||||||||||||
Sbjct: 445 tgtgtgtgtgtgtgtgtgt 463


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space:   169764
Effective search space used:   169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information