Query= MSMg01no380_a22.b1 MSMg01no380_a22.b1 CHROMAT_FILE:
MSMg01no380_a22.b1 PHD_FILE: MSMg01no380_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:00 2005
(249 letters)
>mm_chr2_51492067_51492715
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 atatgctctggtgggtagtcccataaatatcacgagaaaaatctcctgtgtggaagcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atatgctctggtgggtagtcccataaatatcacgagaaaaatctcctgtgtggaagcagt 390
Query: 61 gccaactgactatgataatgagtctacaattacaagactcaggagggtgagacaaaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gccaactgactatgataatgagtctacaattacaagactcaggagggtgagacaaaggct 330
Query: 121 ttcatccattcctggtctggggtaaaagctcctgacctctacaaaagtgctgtacattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcatccattcctggtctggggtaaaagctcctgacctctacaaaagtgctgtacattcc 270
Query: 181 cagatgtggcatgacaaagaagtgaagcctcaggtctcaagtcttggtcctgtctgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cagatgtggcatgacaaagaagtgaagcctcaggtctcaagtcttggtcctgtctgtttt 210
Query: 241 agaggtcta 249
|||||||||
Sbjct: 209 agaggtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no380_a22.g1 MSMg01no380_a22.g1 CHROMAT_FILE:
MSMg01no380_a22.g1 PHD_FILE: MSMg01no380_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:00 2005
(566 letters)
>mm_chr2_51330772_51331738
Length = 967
Score = 1081 bits (559), Expect = 0.0
Identities = 565/567 (99%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 1 aaaagtgagtgtccagttcaggaaatttcaaggaaatatgtacattacaggataagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagtgagtgtccagttcaggaaatttcaaggaaatatgtacattacaggataagtgca 260
Query: 61 gaaaac-tatctgtaattgttagtgattaggaccattcaagagaatccatagaccatgtc 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaacatatctgtaattgttagtgattaggaccattcaagagaatccatagaccatgtc 320
Query: 120 ctgatacaatttggatgaagatgagttgctgtttgtctcttgtagtactcaaacttataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgatacaatttggatgaagatgagttgctgtttgtctcttgtagtactcaaacttataa 380
Query: 180 ctctccagcctcagccttctgagtaggtgagataaccagtatgtgtcaccatgctactga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccagcctcagccttctgagtaggtgagataaccagtatgtgtcaccatgctactga 440
Query: 240 ataggaagaagctgtcctcaaggtagccaattctcagtgatgataagcacctgcaagcat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataggaagaagctgtcctcaaggtagccaattctcagtgatgataagcacctgcaagcat 500
Query: 300 gcctttggaaagcaagtcaaccagtctcaatcccacactccacctctcgcattctgtcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctttggaaagcaagtcaaccagtctcaatcccacactccacctctcgcattctgtcag 560
Query: 360 gttcctgcaatctgagacacagttaacctctccgggccattccagagccagcaagcgtag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttcctgcaatctgagacacagttaacctctccgggccattccagagccagcaagcgtag 620
Query: 420 tagagactacacaaacttttgagatcttccctgaattcatctcattaagatttcctctta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagagactacacaaacttttgagatcttccctgaattcatctcattaagatttcctctta 680
Query: 480 ccctagagagaatggcaaagatctacagaacagctgataacaagtgctgaaggggcatgg 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctagagagaatggcaaagatcaacagaacagctgataacaagtgctgaaggggcatgg 740
Query: 540 agaaagggaaatcttcattcatcattg 566
|||||||||||||||||||||||||||
Sbjct: 741 agaaagggaaatcttcattcatcattg 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 967
Length adjustment: 10
Effective length of query: 556
Effective length of database: 957
Effective search space: 532092
Effective search space used: 532092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
