Query= MSMg01no381_n18.b1 MSMg01no381_n18.b1 CHROMAT_FILE:
MSMg01no381_n18.b1 PHD_FILE: MSMg01no381_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:24 2005
(440 letters)
>mm_chr2_104758161_104759000
Length = 840
Score = 716 bits (370), Expect = 0.0
Identities = 404/436 (92%), Gaps = 32/436 (7%)
Strand = Plus / Plus
Query: 5 gaattcttagcttactggtcatacaaaacaggtagctggtcaaagctggcctgcaggtct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gaattcttagcttactggtcatacaaaacaggtagctggtcaaagctggcctgcaggtct 296
Query: 65 tagtttgttggtttatccatccatctttccttcccatctcttttcctttctccctctttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tagtttgttggtttatccatccatctttccttcccatctcttttcctttctccctctttc 356
Query: 125 tctccctccctccctcgcctctccttccttccttccttccttccttccttccttccttcc 184
|||||||||||||||||||||||||||||||
Sbjct: 357 tctccctccctccctcgcctctccttccttc----------------------------- 387
Query: 185 ttacttccttccttccttccttccttccttccttccttcccagtcttagaaggtggagac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ---cttccttccttccttccttccttccttccttccttcccagtcttagaaggtggagac 444
Query: 245 agcgggagggcatgaaatgaatagcacagtctttctttaagactgcagatatagtgacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcgggagggcatgaaatgaatagcacagtctttctttaagactgcagatatagtgacag 504
Query: 305 cttctgaattagtgacaaggtgttacaaggttttctagtagaaatgctgataaagtgagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttctgaattagtgacaaggtgttacaaggttttctagtagaaatgctgataaagtgagt 564
Query: 365 gttgtgtcactacagagcctatttggagactttcaagaaattctttttactctccgaact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttgtgtcactacagagcctatttggagactttcaagaaattctttttactctccgaact 624
Query: 425 gtagctctatggcaag 440
||||||||||||||||
Sbjct: 625 gtagctctatggcaag 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_n18.g1 MSMg01no381_n18.g1 CHROMAT_FILE:
MSMg01no381_n18.g1 PHD_FILE: MSMg01no381_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:24 2005
(445 letters)
>mm_chr2_104914512_104915356
Length = 845
Score = 542 bits (280), Expect = e-158
Identities = 301/308 (97%)
Strand = Plus / Minus
Query: 138 agatctctcactgaagccagagcttaattcagctaggacagctggccagtgaggtccagg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agatctctcactgaagccagagcttaattcagctaggacagctggccagtgaggtccagg 786
Query: 198 aatccaccagtctctgcctctccagcaatggggttataggtacatctcagctagttttct 257
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 785 aatccaccagtctctgcctctccagcaatggggttataggtacatctcacctagttttct 726
Query: 258 acatgaatccctggacatctgaactcaggtcctcatgcttgcgtgacaagcactttacca 317
|||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 acatgagtctctgggcatctgaactcaggtcctcatgcttgcgtgacaagcactttacca 666
Query: 318 accaagtcacttcctaagccttggaaatccacttttagatcatattcattgtgtagtaga 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 accaagtcacttcctaagccttggaaatccacttttagatcatattcattgtgtagtaga 606
Query: 378 cagacaggatcccctgtcctctctataaaggcctatcagaatcaagggctaagaggggac 437
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 605 cagacaggatcccctgtcctctctataaaagcctatcagaatcaagggctaggagaggac 546
Query: 438 tatgaaca 445
||||||||
Sbjct: 545 tatgaaca 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
