Query= MSMg01no382_a16.b1 MSMg01no382_a16.b1 CHROMAT_FILE:
MSMg01no382_a16.b1 PHD_FILE: MSMg01no382_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:39 2005
(608 letters)
>mm_chr2_12318368_12319376
Length = 1009
Score = 1127 bits (583), Expect = 0.0
Identities = 594/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Minus
Query: 12 gaattcaattgaagatgc-aatgagcctttgatagaccctgtgtacgggcatggcaggta 70
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaattcaattgaagatgcaaatgagcctttgatagaccctgtgtacgggcatggcaggta 750
Query: 71 atgtctgtagtctgctgtgtcttactaaatctaggcattaggagcaggaggctctctgat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atgtctgtagtctgctgtgtcttactaaatctaggcattaggagcaggaggctctctgat 690
Query: 131 gaatgtgttggtagcagacgtctatggtcttgactgaccctgtgccaccatgtattattg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gaatgtgttggtagcagacgtctatggtcttgactgaccctgtgccaccatgtattattg 630
Query: 191 cactgttttagtcagtgcgtgctgtgtgtgtgtggccagtgatgacatccaatttcaggt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cactgttttagtcagtgcgtgctgtgtgtgtgtggccagtgatgacatccaatttcaggt 570
Query: 251 tgtttacacatgactcttatgatgacaagtatcttgtttacattagtaatggcaatatat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgtttacacatgactcttatgatgacaagtatcttgtttacattagtaatggcaatatat 510
Query: 311 gttaacaaagtgttgtttatatccatttatggcctttaaaaatgtctaaatttacccaca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttaacaaagtgttgtttatatccatttatggcctttaaaaatgtctaaatttacccaca 450
Query: 371 ttaacttagaaataaatattttcttacctatctgggttagtttcttctagagttgaaaca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttaacttagaaataaatattttcttacctatctgggttagtttcttctagagttgaaaca 390
Query: 431 attcttatctagttttttctttttttgcttatattgcccaaatcaatagaatagaaaaat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 attcttatctagttttttctttttttgcttatattgcccaaatcaatagaatagaaaaat 330
Query: 491 tcatctattctcacacaagtccttctttttgcatgtgtctaccttagctgttaagaatcg 550
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 329 tcatctattctcacacaagtccttccttttgcacgtgtctaccttagctgttaagaatcg 270
Query: 551 tttaccttccatcaaagattgcatatganatataattgtaatggtctgcatctgttgc 608
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 269 tttaccttccatcaaagattgcatatgaaatataattgtaatggtctgcatctgttgc 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space: 597402
Effective search space used: 597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_a16.g1 MSMg01no382_a16.g1 CHROMAT_FILE:
MSMg01no382_a16.g1 PHD_FILE: MSMg01no382_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:39 2005
(495 letters)
>mm_chr2_12249750_12250647
Length = 898
Score = 924 bits (478), Expect = 0.0
Identities = 492/498 (98%), Gaps = 3/498 (0%)
Strand = Plus / Plus
Query: 1 tttgaagcatgtgcctaactgtggcattctctttcagtttgcagatgtggggaaaggaac 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 201 tttgaagcatgtgcctaactgtggcattctctttcggtttgcagatgtgggggaaggaac 260
Query: 61 ggggacattggaataaagagtggggggtgggggaagggcaacctgagagacacactagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggacattggaataaagagtggggggtgggggaagggcaacctgagagacacactagag 320
Query: 121 gaaaaata---gaggaaaagggggagggtattcccttgggtgctgctggcttttgttttg 177
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaaataatagaggaaaagggggagggtattcccttgggtgctgctggcttttgttttg 380
Query: 178 tttttgaaagcagcaaaacccaaagctcaatttgcttttgattagcctcaactgctgaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttgaaagcagcaaaacccaaagctcaatttgcttttgattagcctcaactgctgaag 440
Query: 238 aaaccctttgtctctggcaaaggcagggaggagtttatatagtagtaaagcaatccctgg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccctttgtctctggcaaaggcagggaggagtttatatagtagtaaagcaatccctgg 500
Query: 298 tgtgtgatttgggctgcctaatgaaaccctaacagtgataaaggcaggccattccctagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtgatttgggctgcctaatgaaaccctaacagtgataaaggcaggccattccctagg 560
Query: 358 gcctgggcgataatgtgtaaagaatggaacaggatcctacattcagatgcctttgaaact 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctgggcgataatgtgtaaagaatggaacaggatcctacattcagatgcctttgaaact 620
Query: 418 gtggctacatggctgtttggtttttctcctgtaggtgagctctttaaatcggaacatcta 477
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 gtggctacatggctgtttggtttttctcgtgtaggtgagctctttaaatcggaacatcta 680
Query: 478 gatttctgggtagcaggg 495
||||||||||||||||||
Sbjct: 681 gatttctgggtagcaggg 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 898
Length adjustment: 10
Effective length of query: 485
Effective length of database: 888
Effective search space: 430680
Effective search space used: 430680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
