Query= MSMg01no383_b13.b1 MSMg01no383_b13.b1 CHROMAT_FILE:
MSMg01no383_b13.b1 PHD_FILE: MSMg01no383_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:02 2005
(555 letters)
>mm_chr2_115003707_115004661
Length = 955
Score = 739 bits (382), Expect = 0.0
Identities = 388/390 (99%)
Strand = Plus / Minus
Query: 5 gaattcaactgatgttttctttctttcttttttttttctaagaaaatccaattcttatga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattcaactgatgttttctttctttcttttttttttctaagaaaatccaattcttatga 331
Query: 65 ctaagtgtgaccctcacaccccttttctctctcaaatatgaatgaaaaaattgatcattc 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctaagtgtgaccctgacaccccttttctctctcaaatatgaatgaaaaaattgatcattc 271
Query: 125 tcctattcagtcctgacagatttagtgagtcagttatcctctcaagagactcggggtctt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcctattcagtcctgacagatttagtgagtcagttatcctctcaagagactcggggtcta 211
Query: 185 gtgtagtggctcagttagtaaaatgcttgtcatgtggcatgaggacaggagatttaatcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtgtagtggctcagttagtaaaatgcttgtcatgtggcatgaggacaggagatttaatcc 151
Query: 245 ccagacctcatgcaaagaagctgggataaccatctgctcttgtattcccagaactggggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ccagacctcatgcaaagaagctgggataaccatctgctcttgtattcccagaactggggc 91
Query: 305 agacagagcctgtgtaatcactgaatgcactgtccagccagcttacagtaatcagcaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 agacagagcctgtgtaatcactgaatgcactgtccagccagcttacagtaatcagcaagt 31
Query: 365 tcaagttcaaaggatagacctgtttcaaaa 394
||||||||||||||||||||||||||||||
Sbjct: 30 tcaagttcaaaggatagacctgtttcaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_b13.g1 MSMg01no383_b13.g1 CHROMAT_FILE:
MSMg01no383_b13.g1 PHD_FILE: MSMg01no383_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:02 2005
(134 letters)
>mm_chr2_114921787_114922317
Length = 531
Score = 209 bits (108), Expect = 6e-59
Identities = 127/134 (94%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 1 atggaccatggcctaaagatcccgtgggtcttcaaagcatgggagaattaaatagttaaa 60
||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 201 atggaccat-gcctaaagatcccgt-ggtcttcaaagcat-ggagaattaaatagttaaa 257
Query: 61 ttcttaaaattatgagagaaagagaacaagggagaagacataagagagaagacaaagcat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 258 ttcttaatattatgagagaaagagaacaagggagaagacataagagagaagactaagcat 317
Query: 121 tannagcaagaaca 134
|| ||||||||||
Sbjct: 318 taaaagcaagaaca 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 531
Length adjustment: 8
Effective length of query: 126
Effective length of database: 523
Effective search space: 65898
Effective search space used: 65898
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
