MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-383D09
Chromosome	2 (Build37)
Map Location	22,887,564 - 22,888,065
singlet/doublet	singlet
Overlap gene	Abi1
Upstream gene	LOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, 1200016E24Rik
Downstream gene	Acbd5, Mastl, Yme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1, Hnmt
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC637235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:637235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 3 Proteins pseudo : _no_value

name	Myo3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667663 MGI:2183924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 13 Proteins

name	Myo3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667663 MGI:2183924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14417 MGI:95634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apbb1ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54519 MGI:1861354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdss1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56075 MGI:1889278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	1200016E24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319202 MGI:2441660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs

name	Acbd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74159 MGI:1921409
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mastl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67121 MGI:1914371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yme1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27377 MGI:1351651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931423N10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70981 MGI:1918231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins

name	LOC664835 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664835
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 8 Proteins pseudo : _no_value

name	Nxph2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18232 MGI:107491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 126 ESTs, 26 Proteins pseudo : _no_value

name	4921517N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76857 MGI:1924107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039149 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Sh3d2c-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20406 MGI:1313300
definition	note : SH3 domain protein 2C, pseudogene 1 pseudo : _no_value

name	Hnmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140483 MGI:2153181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myo3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22380640 GeneID:667663 MGI:2183924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IIIA transcript_id : NM_148413.1

name	LOC100041703 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248946 GeneID:100041703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 13 Proteins product : similar to G protein gamma-5 subunit transcript_id : XM_001477173.1

name	Myo3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22380640 GeneID:667663 MGI:2183924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IIIA transcript_id : NM_148413.1

name	Gad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517708 GeneID:14417 MGI:95634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamic acid decarboxylase 2 transcript_id : NM_008078.2

name	Apbb1ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328064 GeneID:54519 MGI:1861354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein transcript_id : NM_019456.1

name	Pdss1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90577180 GeneID:56075 MGI:1889278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prenyl (solanesyl) diphosphate synthase, subunit 1 transcript_id : NM_019501.3

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089350 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077193.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089342 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077192.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089346 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_007380.2

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089344 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_145994.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089340 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077190.1

name	1200016E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249214 GeneID:319202 MGI:2441660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs product : RIKEN cDNA 1200016E24 gene transcript_id : XM_001472371.1

name	Acbd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892632 GeneID:74159 MGI:1921409
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-Coenzyme A binding domain containing 5 transcript_id : NM_028793.2

name	Mastl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383836 GeneID:67121 MGI:1914371
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated serine/threonine kinase-like transcript_id : NM_025979.3

name	Yme1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383574 GeneID:27377 MGI:1351651
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YME1-like 1 (S. cerevisiae) transcript_id : NM_013771.3

name	4931423N10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94366275 GeneID:70981 MGI:1918231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins product : RIKEN cDNA 4931423N10 gene transcript_id : XM_130063.4

name	Nxph2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379890 GeneID:18232 MGI:107491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurexophilin 2 transcript_id : NM_008752.2

name	4921517N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079700 GeneID:76857 MGI:1924107
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921517N04 gene transcript_id : NM_029773.1

name	LOC100039149 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249219 GeneID:100039149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039149 transcript_id : XM_001472660.1

name	Hnmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922616 GeneID:140483 MGI:2153181
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histamine N-methyltransferase transcript_id : NM_080462.2

name	Myo3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22380641 GeneID:667663 MGI:2183924
definition	codon_start : 1 exception : unclassified translation discrepancy product : myosin IIIA protein_id : NP_680779.1

name	LOC100041703 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248947 GeneID:100041703
definition	codon_start : 1 product : similar to G protein gamma-5 subunit protein_id : XP_001477223.1

name	Myo3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22380641 GeneID:667663 MGI:2183924
definition	codon_start : 1 exception : unclassified translation discrepancy product : myosin IIIA protein_id : NP_680779.1

name	Gad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517709 CCDS:CCDS15724.1 GeneID:14417 MGI:95634
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0004351 - glutamate decarboxylase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0019752 - carboxylic acid metabolism [Evidence IEA]; GO:0042136 - neurotransmitter biosynthesis [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA] codon_start : 1 note : glutamate decarboxylase 65 product : glutamic acid decarboxylase 2 protein_id : NP_032104.2

name	Apbb1ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328065 GeneID:54519 MGI:1861354
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : proline-rich protein 48 product : amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein_id : NP_062329.1

name	Pdss1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90577181 GeneID:56075 MGI:1889278
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0000010 - trans-hexaprenyltranstransferase activity [Evidence IDA]; GO:0050347 - trans-octaprenyltranstransferase activity [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008299 - isoprenoid biosynthesis [Evidence IEA] [Evidence IDA]; GO:0051290 - protein heterotetramerization [Evidence IPI]; GO:0006744 - ubiquinone biosynthesis [Evidence IDA] [Evidence IPI] codon_start : 1 note : subunit 1 of solanesyl diphosphate synthase; trans-prenyltransferase product : prenyl diphosphate synthase, subunit 1 protein_id : NP_062374.2

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089351 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 5 is encoded by transcript variant 5; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 5 protein_id : NP_001070661.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089343 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 4 protein_id : NP_001070660.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089347 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 3 protein_id : NP_031406.2

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089345 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 2 protein_id : NP_666106.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089341 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 1 protein_id : NP_001070658.1

name	1200016E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249215 GeneID:319202 MGI:2441660
definition	codon_start : 1 product : hypothetical protein LOC319202 protein_id : XP_001472421.1

name	Acbd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229192 GeneID:74159 MGI:1921409
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : acyl-Coenzyme A binding domain containing 5 protein_id : NP_083069.1

name	Mastl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29568088 CCDS:CCDS15727.1 GeneID:67121 MGI:1914371
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : microtubule associated serine/threonine kinase-like protein_id : NP_080255.2

name	Yme1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305635 CCDS:CCDS15728.1 GeneID:27377 MGI:1351651
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence IEA] codon_start : 1 note : ATP-dependent metalloprotease FtsH1 product : YME1-like 1 protein_id : NP_038799.1

name	4931423N10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249216 GeneID:70981 MGI:1918231
definition	codon_start : 1 product : hypothetical protein LOC70981 protein_id : XP_130063.5

name	Nxph2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468865 CCDS:CCDS15729.1 GeneID:18232 MGI:107491
definition	GO_function : GO:0005102 - receptor binding [Evidence TAS] codon_start : 1 product : neurexophilin 2 protein_id : NP_032778.1

name	4921517N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079701 CCDS:CCDS15730.1 GeneID:76857 MGI:1924107
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC76857 protein_id : NP_084049.1

name	LOC100039149 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249220 GeneID:100039149
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472710.1

name	Hnmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978276 CCDS:CCDS15731.1 GeneID:140483 MGI:2153181
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046539 - histamine N-methyltransferase activity [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IDA] GO_process : GO:0001505 - regulation of neurotransmitter levels [Evidence TAS] codon_start : 1 product : histamine N-methyltransferase protein_id : NP_536710.1

name	LOC637235 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248930 GeneID:637235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 3 Proteins product : similar to 3-phosphoglycerate dehydrogenase pseudo : _no_value transcript_id : XR_032647.1

name	LOC664835 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249217 GeneID:664835
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 8 Proteins product : similar to protein-tyrosine phosphatase pseudo : _no_value transcript_id : XR_030736.1

name	LOC664822 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249218 GeneID:664822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 126 ESTs, 26 Proteins product : similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) pseudo : _no_value transcript_id : XR_030808.1

clone name	MSMg01-507C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159I07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028J14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-383D09.T7 (MSMg01no383_d09.b1)	MSMg01-383D09.TJ (MSMg01no383_d09.g1)
ACC	AG486933	AG486934
length	774	812
length of high quality (start - end)	507 (37 - 543)	---
definition	CHROMAT_FILE: MSMg01no383_d09.b1 PHD_FILE: MSMg01no383_d09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:25:12 2005	CHROMAT_FILE: MSMg01no383_d09.g1 PHD_FILE: MSMg01no383_d09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:25:12 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTG TGTATTCCAGGCTAACCTTGAACTCAAGAGACCCAACTGCTTCTACCGCC TGAGTGCTAAAATAAATGGTGTGCCCTACCATGCTAGGCTCACTTTTTTT TTTTTTTAATACTTGTTTGCATGCATTCCCATGGTGTAAACATGAAAATC AGAGAACAACTGGTGATAGTAAATTCTCTCCTTGTACCACATGGATCCCA AAGATCAATTCAGGTCATCACTCTTGGCAGCAAGTGCTCTAACCCCCTAA GCCTTGCATCAGCCCAGATTTCTACTTTGAAAGTACCACAGTATTGCAAC AAAAGCTCAGGAGGGATAATTGGTCAAAGGAAGATGTGTGAAGATGACAA AAGGATCATTGGGAAGCTATAGCAAATGTCTACTCAACAGTTAATGCAAT GGATATAGAATAGACAAACTTAAGATGTAAAAGCCAGGTGTGGGTGGGGT AGAGAACTGGAAAGAAATTAAGTGCAATTATTGCTCTTGCAGAGGACCCA GATTCAGTCTAGCACCCACATGATGGCTCACAACTATTCATAACTCCAGT TCCAGGGGATCTGGCACCTTTTCTGGCATCACTGGGCATCAAGCAGGCAT GTGGTATGCAGACACAGATGCAGGCAAAACATGCTTACTCCTAAAAATAC CCAATATTTTTTAAAAATGGAATAGAACCCCGGAATTAAAAAATGCTCTC CCTGAATCCCCCCCACTTGAAAAG	TTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXCAGGTTAGTCAGGGCTATGTAGGAAAACCATGTCT CAGAGAGGGTCTGGGGTGGGGGGAGAAAGAGGGAGGGGTATTTTTTTTTT TTTTTTTTTTTTNGTTTTTTCTTTTTTTCTTTTTTCTCTTCCTTTCTTCC CCTTTTCCCTTTTTTCTCCCTCTCCCCTCCTCCTTCTTCTTTCCTTCTTC CTCTTTTTCTCTCTCTTTCTCTTCTCCTTCTCTCCTTTTTTTCCCCCCCC CCCCCCCCTTTTTTTTTTTTCCCCCCTCTTCCTCTCTTTTTTCCTTTTTT TTTCCCCCCTTCTTCTTCTTTCTTTTCCTTTCTCCTTTTCTTCTCTCCCC TTTTCCCCTTTTTCTTCTTCCCCCTTTCCCTTCTTCTCTCTTCTTTTTCT CTTTTTCTTCTCCCTCCTCCTTTTTCCTCTTCTCTTTTCTCCCCTTCTTT TTTCCTTTTCCCTTCCTCTTCTTCCTCCCCCCTTTTTCTCTCCCTCTCCT TTCTCTCCCTCTCCTCTTTTTTCTTTCCTCCCTCTCTTTTTTTCTCTCTT TCTCCCCCCTCCTTTCCTTTCCTCTTCTCTTTTTCTTTTCCCTTTTTCTC TCCTTCTCTCTTCCCCCCTCCTTTCTCTCTCTTTTCTCCTTTTCCTCTCC CTTTCCCTTTCTCCCCTCTCCTTCTTCCTCCCCTTTTTTCTCCTTCCCTT TCCTCCCCCCCTCTTCCCTTTTCCTTTCTCTTTCCCTCTCCCCCCTTCCT CCTTCTTCTTTT
quality values	Open. Hide. 9 9 27 27 15 15 12 15 10 10 10 18 17 34 34 37 19 19 20 18 21 30 39 24 21 8 9 8 8 8 10 13 15 19 25 22 29 32 35 39 28 35 35 31 35 28 28 28 33 43 27 25 12 12 11 12 11 11 9 9 11 18 20 34 37 37 30 37 37 39 39 39 19 18 12 12 12 22 32 41 41 39 39 43 43 43 43 43 48 48 43 43 43 48 48 43 59 47 47 43 43 43 43 43 43 43 43 48 54 57 57 57 57 57 50 48 48 48 48 54 54 57 57 48 48 48 57 54 57 54 47 47 57 44 57 48 57 57 44 44 57 57 57 57 59 59 59 68 68 68 68 68 68 59 59 57 48 50 47 47 47 50 57 57 43 43 43 59 57 57 57 57 57 52 52 52 57 57 59 57 57 57 57 52 52 52 59 59 59 59 54 54 54 57 57 50 50 52 43 43 32 33 35 43 43 57 57 57 57 57 57 57 52 45 45 57 57 57 57 57 57 57 57 57 57 52 52 52 52 52 57 44 59 52 52 52 57 52 52 52 57 57 57 57 57 57 57 57 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 52 62 62 59 62 62 62 62 62 62 62 62 52 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 43 43 26 26 26 44 44 62 62 62 62 62 62 68 68 68 68 57 57 57 57 57 57 52 43 43 47 43 57 57 59 59 59 57 57 57 59 59 59 59 59 57 45 43 43 33 39 43 57 57 57 57 52 57 57 57 57 59 57 57 57 52 57 57 57 59 59 59 37 37 37 50 50 52 52 52 50 59 43 43 43 57 57 57 54 54 54 57 59 57 57 52 57 43 43 43 44 43 59 59 57 57 50 43 50 44 44 44 44 32 42 42 57 59 44 44 43 42 42 42 36 28 30 28 42 42 43 57 47 59 47 47 43 39 37 43 43 43 46 48 43 40 40 40 40 59 57 57 54 42 42 39 41 39 47 39 43 30 34 28 43 42 43 42 48 48 59 47 43 43 39 39 39 48 47 47 35 28 28 41 34 46 47 32 32 15 15 14 14 14 15 15 30 30 34 28 37 41 43 35 35 30 39 39 42 37 43 37 37 36 39 39 43 43 43 43 34 34 30 30 30 32 37 37 34 28 26 13 14 13 23 19 24 22 19 17 11 12 11 22 22 18 11 11 19 15 24 12 19 12 21 14 25 17 17 17 30 30 39 37 33 28 25 23 23 18 18 20 28 28 37 37 40 34 34 28 28 28 22 26 27 24 22 16 17 17 26 26 27 18 25 18 27 21 21 13 16 16 19 13 13 12 12 11 16 34 37 37 33 24 21 13 11 14 13 18 10 14 15 28 19 25 30 30 30 30 24 17 13 18 18 23 19 20 18 18 19 12 12 12 17 12 12 21 20 15 9 9 9 11 11 12 9 9 10 15 15 12 12 14 15 12 11 11 17 17 11 11 9 13 7 8 7 11 9 9 9 10 14 16 16 13 11 13 13 11 11 9 9 9 10 10 10 11 14 26 23 23 22 22 20 11 11 8 10 8 8 9 9 10 9 9 9 13 17 10 10 8 8 8 8 8 8 8 8 8 8 9 9 8 10 8 6 7 7 9 8 8 6 6 6 6 10 10 13 16 20 16 10 10 9 9 8 8 8 8 8 10 12 10 9	Open. Hide. 11 11 17 8 7 7 7 10 12 25 26 36 39 37 37 39 39 31 39 43 39 25 23 11 9 12 6 6 6 6 9 15 21 19 11 14 29 13 15 7 9 9 9 15 28 39 41 42 41 27 21 11 11 9 13 10 11 12 9 9 9 10 9 21 21 9 9 9 23 27 37 37 21 22 14 15 17 23 27 11 11 11 21 23 41 41 41 34 23 23 16 18 9 9 9 9 14 20 23 23 10 11 12 20 25 25 12 8 8 8 8 8 11 12 12 11 12 12 19 19 29 25 18 15 13 13 13 13 14 14 28 28 30 28 28 20 18 15 12 11 10 9 10 9 9 9 9 16 22 22 22 11 9 9 11 15 21 25 20 13 13 3 0 3 7 15 19 16 11 9 13 8 12 12 16 14 8 13 11 8 6 6 6 6 7 6 8 6 8 7 13 17 23 15 8 8 8 8 8 9 14 14 15 12 13 7 8 8 15 11 10 12 23 22 14 12 11 8 8 8 8 8 8 8 10 10 8 10 12 11 8 8 11 8 8 8 10 10 10 10 10 9 10 9 10 11 11 10 22 12 10 10 12 16 13 12 11 11 15 19 12 15 13 12 10 9 10 10 19 9 8 8 8 8 8 8 8 8 10 8 11 13 8 8 8 9 13 12 15 8 11 8 8 9 17 19 8 8 8 8 10 15 10 14 16 13 19 11 8 6 8 10 15 19 17 24 18 24 21 16 9 9 9 9 10 12 10 12 15 12 10 10 10 8 8 8 8 8 8 12 9 9 8 8 12 13 14 16 17 13 10 8 7 7 7 12 12 10 10 10 10 19 21 11 11 11 11 12 8 8 6 7 11 15 27 27 11 10 10 10 10 8 10 9 8 8 8 8 12 10 11 8 8 8 8 12 8 11 11 15 23 15 10 9 15 9 9 8 9 9 9 12 14 25 19 11 8 8 8 8 8 10 10 10 17 10 8 8 8 8 8 8 8 8 8 8 6 6 10 8 8 8 8 8 8 13 13 8 8 8 8 8 10 10 13 16 10 10 7 7 10 12 19 11 11 8 8 8 8 8 7 10 12 11 12 8 7 6 8 8 10 15 15 10 10 11 8 8 8 8 10 10 12 10 10 10 10 8 12 14 16 10 16 12 13 17 9 10 10 6 6 6 8 8 8 10 10 10 8 8 8 8 8 8 10 10 10 14 10 8 8 8 8 19 19 17 7 6 8 8 10 9 8 8 8 8 8 8 12 10 11 10 10 9 9 10 10 12 10 10 10 9 8 10 8 8 8 8 11 12 12 16 12 10 9 10 10 10 9 9 12 9 8 8 9 13 9 9 12 10 12 8 8 8 8 10 8 11 11 11 11 9 9 9 15 10 13 10 10 8 15 9 9 15 12 12 8 8 8 8 9 8 14 10 10 6 8 8 10 10 9 9 9 8 8 8 10 10 13 13 19 12 9 9 12 12 7 7 8 9 9 11 10 13 14 8 8 6 6 8 8 10 10 11 25 15 13 9 9 13 15 12 16 22 21 8 8 6 6 8 6 9 15 12 8 10 8 8 8 13 13 26 10 15 10 8 8 8 8 7 8 12 9 12 10 15 15 24 22 17 11 8 8 8 19 11 8 8 8 8 8 10 10 9 10 8 8 8 8 8 8 8 8 9 14 11 18 19 27 11 11 11 8 8 8 8 8 13 9 8 7 7 8 22 11 12 11 9 9 9 9 12 11 9 9 9 11 11 8 8 9 10 8 10 8 8 8 6 6 8 8 15 15 13 12 8 8 8 8 8 13 9 9 8 9 11 8 8 8 8 8 10 15 7 9 15 22 9 9 10 10 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no383_d09.b1 MSMg01no383_d09.b1 CHROMAT_FILE:
MSMg01no383_d09.b1 PHD_FILE: MSMg01no383_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:12 2005
         (507 letters)



>mm_chr2_22887359_22888265
          Length = 907

 Score =  932 bits (482), Expect = 0.0
 Identities = 498/504 (98%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattgtgtattccaggctaaccttgaactcaagagacccaactgcttctaccgc 63
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcattgtgtagaccaggctaaccttgaactcaagagacccaactgcttctaccgc 265

                                                                       
Query: 64  ctgagtgctaaaataaatggtgtgccctaccatgctaggctcacttttttttttttttaa 123
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||
Sbjct: 266 ctgagtgctaaaataaatggtgtgccccaccatgctaggctcactttttttttttt--aa 323

                                                                       
Query: 124 tacttgtttgcatgcattcccatggtgtaaacatgaaaatcagagaacaactggtgatag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacttgtttgcatgcattcccatggtgtaaacatgaaaatcagagaacaactggtgatag 383

                                                                       
Query: 184 taaattctctccttgtaccacatggatcccaaagatcaattcaggtcatcactcttggca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaattctctccttgtaccacatggatcccaaagatcaattcaggtcatcactcttggca 443

                                                                       
Query: 244 gcaagtgctctaaccccctaagccttgcatcagcccagatttctactttgaaagtaccac 303
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 gcaagtgctctaaccccctaagccttgcatcagtccagatttctactttgaaagtaccac 503

                                                                       
Query: 304 agtattgcaacaaaagctcaggagggataattggtcaaaggaagatgtgtgaagatgaca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtattgcaacaaaagctcaggagggataattggtcaaaggaagatgtgtgaagatgaca 563

                                                                       
Query: 364 aaaggatcattgggaagctatagcaaatgtctactcaacagttaatgcaatggatataga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaaggatcattgggaagctatagcaaatgtctactcaacagttaatgcaatggatataga 623

                                                                       
Query: 424 atagacaaacttaagatgtaaaagccaggtgtgggtggggtagagaactggaaagaaatt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atagacaaacttaagatgtaaaagccaggtgtgggtggggtagagaactggaaagaaatt 683

                                   
Query: 484 aagtgcaattattgctcttgcaga 507
           ||||||||||||||||||||||||
Sbjct: 684 aagtgcaattattgctcttgcaga 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information