Query= MSMg01no384_b12.b1 MSMg01no384_b12.b1 CHROMAT_FILE:
MSMg01no384_b12.b1 PHD_FILE: MSMg01no384_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:18 2005
(516 letters)
>mm_chr2_94392828_94393746
Length = 919
Score = 934 bits (483), Expect = 0.0
Identities = 506/515 (98%), Gaps = 3/515 (0%)
Strand = Plus / Plus
Query: 5 gaattccttaaatcaatgggtttgggttgttttgcaaatctttcattatggtcctaattg 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttaaaccaatgggtttgggttgttttgcaaatctttcattatggtcctaattg 264
Query: 65 tgttctgactttctttggaaactgtgttcttactttcttgtgacacccaaattcaaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttctgactttctttggaaactgtgttcttactttcttgtgacacccaaattcaaagtg 324
Query: 125 tcttcctagttaggaatggacatttaaggactgtgaattcactgcccgtaaataatcaaa 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 325 tcttcctagttaggaatggacatttaaggactgtgaattcactgcctgtaaataagcaaa 384
Query: 185 ctaggcaaagaagcactaaaaggagaggacggatggatggaggcctttgggagaggaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaggcaaagaagcactaaaaggagaggacggatggatggaggcctttgggagaggaccc 444
Query: 245 cgcacctccacattgtatcctgccactctgtctccatgagacctcgtggcttctgttctt 304
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 ctcacctccacattgtatcctgccactctgtctccatgagaccttgtggcttctgttctt 504
Query: 305 accaaatccatttttaaggaattattttcttaaccatgatagcacaagtcacttttcctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 accaaatccatttttaaggaattattttcttaaccatgatagcacaagtcacttttcctc 564
Query: 365 ccaaaaaattcctgctctgatgtagtttctgcctattgctaaacaatcaaaacactct-- 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccaaaaattcctgctctgatgtagtttctgcctattgctaaacaatcaaaacactctaa 624
Query: 423 -gacactctgggatttgccaggctaagatgtgagatgctgagcaaacccaaggcaaaggg 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggacactctgggatttgccaggctaagatgtgagatgctgagcaaacccaaggcaaaggg 684
Query: 482 caagactgtgcctcgggcagttcatatatttgagg 516
|||||||||||||||||||||||||||||||||||
Sbjct: 685 caagactgtgcctcgggcagttcatatatttgagg 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 919
Length adjustment: 10
Effective length of query: 506
Effective length of database: 909
Effective search space: 459954
Effective search space used: 459954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_b12.g1 MSMg01no384_b12.g1 CHROMAT_FILE:
MSMg01no384_b12.g1 PHD_FILE: MSMg01no384_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:18 2005
(416 letters)
>mm_chr2_94607279_94608094
Length = 816
Score = 685 bits (354), Expect = 0.0
Identities = 397/414 (95%), Gaps = 5/414 (1%)
Strand = Plus / Minus
Query: 1 ttcccccagctgttgacacctcagactagaactcgattcagagaagtcaattcatggact 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 517 ttcccccagctgttgacacctcagactagaactccattcagagaagtcaattcatggact 458
Query: 61 ggttgaggaaaggtcaggctgacaaaagaacttgcatgtgtttccttttcctggtgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 457 ggttgaggaaaggtcaggctgacaaaagaacttgcatgtgtttccttttcctgatgacct 398
Query: 121 tttttaacatgcaagtgctagagtccattgccaattattaaatcagggggagtggagcta 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 397 tttttaacatgcaagtgctagagtccattgccgattattaaatcagggggagtgaagctg 338
Query: 181 agctggttacacgtgctcacctttaaattctgacagggaaccaaggtcaagaatcatagg 240
|||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 337 agctgggtacacgtgctcacccttaaattctgacagggaaccaaggttaagaatcatagg 278
Query: 241 tttcaagcactgagtctcaatgagtttcaatgtgtctcccaaatagctggatcatcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 277 tttcaagcactgagtctcaatgagtttcaatgtgtctcccaaatagctgtatcatcatct 218
Query: 301 gttagaaacatagtctcatgggctgggaatggctcagcttttaacagcacatactactct 360
||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 217 gttagaaacatggtctcctgggctgggaatggct-----tttaacagcacatactactct 163
Query: 361 tgaagagagctgtcctggctagggttttggggctctctggtttgggttttgttt 414
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 162 tgaagagagctgtcctggttagggttttggggctctctggtttgggttttgttt 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
