XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAACAATA
ATGATGGTAATGACTTTTTTTTCCAAATTCTACAACTTAAATGTGGGCCA
CTGAGATGGCTCAGCAGATGAAGGTGCCTGCCACCAAACCTGATAATCAG
AGTTCAATCTGCAAGTCCCACAGGGTGGCAGGAGTTGTCCTTTGACTTTC
ACATAGGGCCATAGCAGCAAATGTCCCTTCTAAAAATTATGAATATATAA
GTTTTAAAAATTTTAAGCAAAACTTACTCTTTTGACCATTTTTTTTCTTT
TTTGAAACTCCTTAAGGAAATTATTGTTACCTACATTCAACCAACCTACT
CAGGTTCTTCTAGGTCAAACAACATTCTAAGAAACTGATAGCTATGAAAC
CCCAAAGGCCACACAGGACTGAGACAAAGGTAGGTGATTTTCATTGTTCT
TCCTGTCCTCCATTCTGATCTCTCCAGACTTAGTCTTGCTGCATGCAGCC
TGCCTACAGGAGCTCCTCCTTCCACATCTTCTCTACTCCCTGGGACTCAG
TGTCTCAGTGCAAACACCAGTGGCCTGGCTCTCTCCTGATGCCCTATTAG
TGTTTTTTTCTAGCCATCACAGAATATAGATTAAAGCTATTTTGAGATTT
TTATCTAACTCAAGTCAGAATGCCAAGATCATAAAAAACATGACAACTGG
CAAGCTGTGGAAAAGAAAACACTTTTTCCTGCTATGGGAAGGCAACAGCC
CCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXAATAACTCACTTAAAGAAATACAGGAGAACACTGCTAAAG
AGTTACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAA
GTCCTTAAAGAAAAACAGGAAGACACAACCAAACAGGTAGAAGTCCTTAT
AGAAAAACAGGAAAATACATCCAAACAGGTGATGGAAATGAACAAAACCA
TACTAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTAAG
GCGACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGC
CAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAG
AAGACTCCATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAATGC
AAAAAGATCCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAG
ACCAAACCTACGGATAATAGGAATGGATGAGAATGAAGATTTTCAACTCA
AAGGACCAGCAAAAATCTTCAACAAAATTATTGAAGAAAACTTCCCAAAT
CTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAA
TAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACAC
CAAATGCCCTAAATAAAGATAGAATACTACAAGCAGTAAGGGAAAAAGGC
CAAGT

Query= MSMg01no384_b14.b1 MSMg01no384_b14.b1 CHROMAT_FILE:
MSMg01no384_b14.b1 PHD_FILE: MSMg01no384_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:19 2005
         (520 letters)



>mm_chr2_14952957_14953877
          Length = 921

 Score =  845 bits (437), Expect = 0.0
 Identities = 492/515 (95%), Gaps = 12/515 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaacaataatgatggtaatgactt-ttttttccaaattctacaacttaaatgtgg 63
           |||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||||
Sbjct: 214 gaattcaacaataatgatggaaatga-ttattttttc-aaattctacaacttaaatgtgg 271

                                                                       
Query: 64  gccactgagatggctcagcagatgaaggtgcctgccaccaaacctgataatcagagttca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gccactgagatggctcagcagatgaaggtgcctgccaccaaacctgataatcagagttca 331

                                                                       
Query: 124 atctgcaagtcccacagggtggcaggagttgtcctttgactttcacatagggccatagca 183
           ||||||||||||||||||        ||||||||||||||||||||| ||||||||||||
Sbjct: 332 atctgcaagtcccacagg--------agttgtcctttgactttcacacagggccatagca 383

                                                                       
Query: 184 gcaaatgtcccttctaaaaattatgaatatataagttttaaaaattttaagcaaaactta 243
           ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 384 gcaaatgtcccttctaaaaattatggatatataaattttaaaaattttaagcaaaactta 443

                                                                       
Query: 244 ctcttttgaccatttttttt-cttttttgaaactccttaaggaaattattgttacctaca 302
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcttttgaccatttttttttcttttttgaaactccttaaggaaattattgttacctaca 503

                                                                       
Query: 303 ttcaaccaacctactcaggttcttctaggtcaaacaacattctaagaaactgatagctat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 ttcaaccaacctactcaggttcttctaggtcaaacaacattctaagaaactgagagctat 563

                                                                       
Query: 363 gaaaccccaaaggccacacaggactgagacaaaggtaggtgattttcattgttcttcctg 422
           |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 564 gaaaccccaaaggccacacagggctgagacgaaggtaggtgattttcattgttcttcctg 623

                                                                       
Query: 423 tcctccattctgatctctccagacttagtcttgctgcatgcagcctgcctacaggagctc 482
           ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 624 tcctccactcagatctctccagactcagtcttgctgcatgcagcctgcctacaggagctc 683

                                              
Query: 483 ctccttccacatcttctctactccctgggactcag 517
           |||||||||||||||||||||||||||||| ||||
Sbjct: 684 ctccttccacatcttctctactccctgggattcag 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space:   464610
Effective search space used:   464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)