Query= MSMg01no384_c07.b1 MSMg01no384_c07.b1 CHROMAT_FILE:
MSMg01no384_c07.b1 PHD_FILE: MSMg01no384_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(500 letters)
>mm_chr2_171970953_171971852
Length = 900
Score = 936 bits (484), Expect = 0.0
Identities = 493/496 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgttgtaaaaatgctacaagagagatgacttaaaaccaaatagaaagatatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgttgtaaaaatgctacaagagagatgacttaaaaccaaatagaaagatatcc 264
Query: 65 tctcacagttgagaaagccagaagccacggtgtaccagggccttgctctccctgaagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctcacagttgagaaagccagaagccacggtgtaccagggccttgctctccctgaagatg 324
Query: 125 atagaaacatccatgatcctgtcagtttctgggaactgccgactgtccttggtttgtgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atagaaacatccatgatcctgtcagtttctgggaactgccgactgtccttggtttgtgct 384
Query: 185 tcccactgctctcatccctgcattatcatggccttcttcatcatgcctcttctatccacc 244
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 tcccactgctttcatccctgcattatcatggccttcttcatcatgcctcttctatccatc 444
Query: 245 catcttcctgtgacattcttctcctgtatgtctcaaaatatctttcactgtataagagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcttcctgtgacattcttctcctgtatgtctcaaaatatctttcactgtataagagca 504
Query: 305 tctctaatccaaatacctccaccttagccccacaaccatccagagtctctctcctaataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctctaatccaaatacctccaccttagccccacaaccatccagagtctctctcctaataa 564
Query: 365 ggctatatccccaagtgccaggaatcataactcgtttgtctgaggaaacacaactcaact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggctatatccccaagtgccaggaatcataactcgtttgtctgaggaaacacaactcaact 624
Query: 425 cacaacatgatgacatgcttggttttgtagcagagaagaaagataggctgagaacacaac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacaacatgatgacatgcttggttttgtagcagagaagaaagataggctgagaacacaac 684
Query: 485 atgaaggcttgtggga 500
|||| |||||||||||
Sbjct: 685 atgagggcttgtggga 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_c07.g1 MSMg01no384_c07.g1 CHROMAT_FILE:
MSMg01no384_c07.g1 PHD_FILE: MSMg01no384_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(529 letters)
>mm_chr2_172001657_172002585
Length = 929
Score = 770 bits (398), Expect = 0.0
Identities = 408/412 (99%), Gaps = 2/412 (0%)
Strand = Plus / Minus
Query: 1 tgaagtagttaaaagcgtagctaaatggggcactgcctttgtgagatgtgagcacattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgaagtagttaaaagcgtagctaaatggggcactgcctttgtgagatgtgagcacattca 353
Query: 61 agctcattcatgaacttgccatgcacagttgcggggttggttgggtcactgtgtgctcta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 352 agctcattcatgaacttgccatgcacagttgaggggttggttgggtcactgtgtgctcta 293
Query: 121 caaagcctcagtgactctatgatccccgaattagatgatcgagggaaaaccaaattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 caaagcctcagtgactctatgatccccgaattagatgatcgagggaaaaccaaattctac 233
Query: 181 ctatgtctgaaacatctggaactgtactggtgtggggatgtaaccaaactggcagagtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ctatgtctgaaacatctggaactgtactggtgtggggatgtaaccaaactggcagagtgc 173
Query: 241 tttcccaggacacaggaggctctggttcaatcctcagcaaaggctcaaggtcatccttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tttcccaggacacaggaggctctggttcaatcctcagcaaaggctcaaggtcatccttgg 113
Query: 301 ctagttagt--gagcctaggctacacaagaccctgaacattttggtaatcactgactgag 358
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ctagttagtgagagcctaggctacacaagaccctgaacattttggtaatcactgactgag 53
Query: 359 aaggactctgtggtcctcagagactccgtgtgctactatcacttttgatggt 410
||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 aagaactctgtggtcctcagagactccgtgtgctactatcacttttgatggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
