Query= MSMg01no384_j10.b1 MSMg01no384_j10.b1 CHROMAT_FILE:
MSMg01no384_j10.b1 PHD_FILE: MSMg01no384_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:55 2005
(522 letters)
>mm_chr2_103648179_103649100
Length = 922
Score = 986 bits (510), Expect = 0.0
Identities = 516/518 (99%)
Strand = Plus / Minus
Query: 5 gaattcagggcattcctgggtactgaccttcaaccccagctggagtgtagaactggagtt 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gaattcagggcaaccctgggtactgaccttcaaccccagctggagtgtagaactggagtt 663
Query: 65 cagtgcttaaagacacagtaccagaaacaccatgtggagcaggaagcatgctcccagaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagtgcttaaagacacagtaccagaaacaccatgtggagcaggaagcatgctcccagaat 603
Query: 125 tcagattgctgcagagtgaacaggcaatggtcagaaacaggtgtcaggaaacatgagcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcagattgctgcagagtgaacaggcaatggtcagaaacaggtgtcaggaaacatgagcat 543
Query: 185 gggcctttgggtttgacttttctgctgcaaagctggagaagccaagtaggtctgatgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gggcctttgggtttgacttttctgctgcaaagctggagaagccaagtaggtctgatgcca 483
Query: 245 agagaaagctttgaactttagttttttattctgatgaggtaggggaagcttaatttttaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agagaaagctttgaactttagttttttattctgatgaggtaggggaagcttaatttttaa 423
Query: 305 aaaagagaagaggggagggagaaatggggaaagaaaccaaggaggcaaggggcaattaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaagagaagaggggagggagaaatggggaaagaaaccaaggaggcaaggggcaattaac 363
Query: 365 aaggtctttcaagactgactttaagttgagttcaaatctagcactgggcagaccatgatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaggtctttcaagactgactttaagttgagttcaaatctagcactgggcagaccatgatg 303
Query: 425 ttgagagtggaatggaagtaaacgttcttacagttaggttgtactaggttgctaaaggtc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttgagagtggaatggaagtaaacgttcttacagttaggttgtactaggttgctaaaggtc 243
Query: 485 agagccttctcagaggaaggaaatataagtaaagagtg 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agagccttctcagaggaaggaaatataagtaaagagtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_j10.g1 MSMg01no384_j10.g1 CHROMAT_FILE:
MSMg01no384_j10.g1 PHD_FILE: MSMg01no384_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:55 2005
(588 letters)
>mm_chr2_103464996_103465984
Length = 989
Score = 1100 bits (569), Expect = 0.0
Identities = 584/589 (99%), Gaps = 1/589 (0%)
Strand = Plus / Plus
Query: 1 ctggaagaaagggaggaatccctgcaagtctggcatcttgtgcacgtgtgacagcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaagaaagggaggaatccctgcaagtctggcatcttgtgcacgtgtgacagcatcaa 260
Query: 61 cggacaaggcagtaagcctttatctatcaattgtcaccagcttccctgtgacaaaaatgt 120
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agggcaaggcagtaagcctttatctatcaattgtcaccagcttccctatgacaaaaatgt 320
Query: 121 gcagaatagctctgtaagctcagagcctggtgtggtcttttcataatgactgcccattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagaatagctctgtaagctcagagcctggtgtggtcttttcataatgactgcccattcc 380
Query: 181 tgcatcttcactagtaaaagacctgcagtataatggaaacgggg-aaaggaagagccacc 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tgcatcttcactagtaaaagacctgcagtataatggaaacgggggaaaggaagagccacc 440
Query: 240 ttgcattcctgccagcaaggctacatgaccatgttgcactgtcacagaagcaaagcacac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcattcctgccagcaaggctacatgaccatgttgcactgtcacagaagcaaagcacac 500
Query: 300 actgggtcctgctgcataatgatgaatccccagagtccccagatagtgatcgatagtgac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgggtcctgctgcataatgatgaatccccagagtccccagatagtgatcgatagtgac 560
Query: 360 gcccagctcaggatctcgaataatgagctactcagtcctgttagagtcaccagccagcct 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 gcccagctcaggatctcgaataatgagctactcagtcctgctagagtcaccagccagcct 620
Query: 420 ctgagaaagctcccctcccccactgtccactcatacaacagacactcccctccccaacct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgagaaagctcccctcccccactgtccactcatacaacagacactcccctccccaacct 680
Query: 480 ccccctcagttggatttcactttgattggcagaggccctgttatttccgcctggattgcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccccctcagttggatttcactttgattggcagaggccctgttatttccgcctggattgcc 740
Query: 540 tgacaacccccctcctcctggtctaattatgctgggtctattcttggtc 588
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgacaacccccctcctcctggtctaattatgctgggtctattcttggtc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 989
Length adjustment: 10
Effective length of query: 578
Effective length of database: 979
Effective search space: 565862
Effective search space used: 565862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
