Query= MSMg01no385_p08.b1 MSMg01no385_p08.b1 CHROMAT_FILE:
MSMg01no385_p08.b1 PHD_FILE: MSMg01no385_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:40 2005
(532 letters)
>mm_chr2_8880154_8881085
Length = 932
Score = 1006 bits (520), Expect = 0.0
Identities = 526/528 (99%)
Strand = Plus / Plus
Query: 5 gaattccacgtggtactacaaacctttgggctgcattaaattccagtttttcataaagat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacgtggcactacaaacctttgggctgcattaaattccagtttttcataaagat 264
Query: 65 cactcaccattctatacttcccatgtcagaggatgctattaacaaaggaagtgaaagtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactcaccattctatacttcccatgtcagaggatgctattaacaaaggaagtgaaagtct 324
Query: 125 taatgtgtactctaaggctgagtgttgattacttctttttgacataaggtcttactaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatgtgtactctaaggctgagtgttgattacttctttttgacataaggtcttactaact 384
Query: 185 cactattgagggtagcctagaactcccgatccttttgcctctcatttctgagagttggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cactattgagggtagcctagaactcccgatccttttgcctctcatttctgagagttggcc 444
Query: 245 ttgaaggtgtgtatcactacaactagctgaccacttgtggactgtactgtaggagtggct 304
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcaggtgtgtatcactacaactagctgaccacttgtggactgtactgtaggagtggct 504
Query: 305 gcccattcccatgtgaagtgtctcagcttgtttgcctgttaaagtgtagctgagtaacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcccattcccatgtgaagtgtctcagcttgtttgcctgttaaagtgtagctgagtaacat 564
Query: 365 tacattctggtggtgtcattgggcgggagtttccgttcacttctgactctgtggcatttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacattctggtggtgtcattgggcgggagtttccgttcacttctgactctgtggcatttc 624
Query: 425 taatagcagcttgaaacagttttaagaaggctatggaggaagcaaaaccaccaagaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taatagcagcttgaaacagttttaagaaggctatggaggaagcaaaaccaccaagaaaaa 684
Query: 485 catctgggcttctcgattcgttcttctcccacagggatacctctgtga 532
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catctgggcttctcgattcgttcttctcccacagggatacctctgtga 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_p08.g1 MSMg01no385_p08.g1 CHROMAT_FILE:
MSMg01no385_p08.g1 PHD_FILE: MSMg01no385_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:40 2005
(512 letters)
>mm_chr2_9072070_9072981
Length = 912
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%)
Strand = Plus / Minus
Query: 1 ccatcttccttctgtcttgctcttctcacctttctccggtcccctttacactggatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 329 ccatcttccttctgtcttgctcttctcacctttctccggtcccctttacactggacccct 270
Query: 61 ttaaaactcacactactctctttgctgctttcagatcatccgatttttgtcagtttctga 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 ttaaaactcacactactctctttgctgctttcagatcatccaatttttgtcagtttctga 210
Query: 121 atagtggtttaacttactttgctcagcaataaattcttgaattctatccatttcttctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atagtggtttaacttactttgctcagcaataaattcttgaattctatccatttcttctgt 150
Query: 181 gaaggatatgaatttactatttgtggctgaatagtgcttctctttgtgttatggtcatgc 240
||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||
Sbjct: 149 gaaggatatgaatttactatttgtgactgaatagtgctcctctctgtgttatggtcatgc 90
Query: 241 tcacacacatgtatgccttgtattgtatttatacatttatgtgctaatggatacctggaa 300
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 89 tcacacacatgtatgctttgtattgtatttatacattcatgtgctaatggatacctggaa 30
Query: 301 tggatacttctcttggatattggag 325
|||||||||||||||||||||||||
Sbjct: 29 tggatacttctcttggatattggag 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
