Query= MSMg01no386_c10.b1 MSMg01no386_c10.b1 CHROMAT_FILE:
MSMg01no386_c10.b1 PHD_FILE: MSMg01no386_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:54 2005
(682 letters)
>mm_chr2_146218000_146219081
Length = 1082
Score = 810 bits (419), Expect = 0.0
Identities = 429/433 (99%), Gaps = 4/433 (0%)
Strand = Plus / Minus
Query: 5 gaattctcactgccttc-c-agttgctgactttattgtagaagataaagtaagtagatgg 62
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaattctcactgcc--cacaagttgctgactttattgtagaagataaagtaagtagatgg 374
Query: 63 cagcgtttcccatcagtgatccccactgtactaagtactgaagctaagtaatgctgtctt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cagcgtttcccatcagtgatccccactgtactaagtactgaagctaagtaatgctgtctt 314
Query: 123 tgaaacaaagggattaaagaggttagagctcagcaagagagagctttttaggaaaagcgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgaaacaaagggattaaagaggttagagctcagcaagagagagctttttaggaaaagcgt 254
Query: 183 ttcttggagtttgcgttccaggaataagaaaaaagcataagctaggtgttataaaagtaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcttggagtttgcgttccaggaataagaaaaaagcataagctaggtgttataaaagtaa 194
Query: 243 cttttactctcctgaagcagttgtggtcttgaaggcttactgcaccattctactaacctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cttttactctcctgaagcagttgtggtcttgaaggcttactgcaccattctactaacctc 134
Query: 303 gggctagtcctggaagctgctagcatcttatctaggcctctgagatttactgctgaataa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gggctagtcctggaagctgctagcatcttatctaggcctctgagatttactgctgaataa 74
Query: 363 gctcaccctttctagttcattctgaattttggctcgccagttcaactcagctgttctggc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctcaccctttctagttcattctgaattttggctcgccagttcaactcagctgttctggc 14
Query: 423 tcaaactcctctt 435
|||||||||||||
Sbjct: 13 tcaaactcctctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_c10.g1 MSMg01no386_c10.g1 CHROMAT_FILE:
MSMg01no386_c10.g1 PHD_FILE: MSMg01no386_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:54 2005
(663 letters)
>mm_chr2_146097154_146098216
Length = 1063
Score = 1282 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 1 tacagttttattaattgattattttggtagacatcttcagtgaaaatgagttagaaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagttttattaattgattattttggtagacatcttcagtgaaaatgagttagaaccat 260
Query: 61 cagatatgggttattaagtcccaacacctacaccactggagaacagcacagctttccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatatgggttattaagtcccaacacctacaccactggagaacagcacagctttccctt 320
Query: 121 gtgagatccactaggcctctgagccacactgaatgctgggcgctattaagaatggattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagatccactaggcctctgagccacactgaatgctgggcgctattaagaatggattgg 380
Query: 181 catggtacagctgctgtcttctggagtaacggggcttctggcaaatgattacttttaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catggtacagctgctgtcttctggagtaacggggcttctggcaaatgattacttttaatc 440
Query: 241 aggtgtcacttgatgtcattaaaatatatcgaggaaggtacaatcatttgtgaaatgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgtcacttgatgtcattaaaatatatcgaggaaggtacaatcatttgtgaaatgcgt 500
Query: 301 ctgggcaaatgaactaaacattcaggttgagaatccacgtgtcattgcaaagagcatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgggcaaatgaactaaacattcaggttgagaatccacgtgtcattgcaaagagcatcaa 560
Query: 361 agccagattccagacccacgcatacacctgcttctaagtgtggtatcatgtcaacagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccagattccagacccacgcatacacctgcttctaagtgtggtatcatgtcaacagggt 620
Query: 421 acagccacctcacccacgcccaccctactgaaccagttggctacaatagaaatcaggacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagccacctcacccacgcccaccctactgaaccagttggctacaatagaaatcaggacc 680
Query: 481 tagaagagggctgagaagttgcaatggtccttgaactttgtggcactccaggttaattgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagaagagggctgagaagttgcaatggtccttgaactttgtggcactccaggttaattgg 740
Query: 541 caaagccgaacaggaagacaactggcaagagaaaaaaagatgtgtttggagccccagcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaagccgaacaggaagacaactggcaagagaaaaaaagatgtgtttggagccccagcac 800
Query: 601 aacacagcagaggccaagaggccaggcttgggcccaagtgcccatcaatccctggttgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aacacagcagaggccaagaggccaggcttgggcccaagtgcccatcaatccctggttgtc 860
Query: 661 tgg 663
|||
Sbjct: 861 tgg 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
