Query= MSMg01no386_d06.b1 MSMg01no386_d06.b1 CHROMAT_FILE:
MSMg01no386_d06.b1 PHD_FILE: MSMg01no386_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:58 2005
(510 letters)
>mm_chr2_43464738_43465646
Length = 909
Score = 915 bits (473), Expect = 0.0
Identities = 497/507 (98%), Gaps = 5/507 (0%)
Strand = Plus / Plus
Query: 6 gaattcaaatcccctgccccaatgttaaaacgctggccacagccacaggtgtttctgtca 65
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaatccccagcaccaatgttaaaacgctggccacagccacaggtgtttctgtca 265
Query: 66 ctcaatcaacgtaaggaggaagagacagaagggttttgggggcttgctgatcagccatca 125
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 ctcaatcaacgtaaggaggaagagacagaagggttttgggggcttgctgaccagccatca 325
Query: 126 tagttcataagaaaatgacaagctcaggttcagtgagcaacaccttctctcagagataag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tagttcataagaaaatgacaagctcaggttcagtgagcaacaccttctctcagagataag 385
Query: 186 gtggatgtgattgagtatgacccttgacatgttgctctgaccactgtatatgtgcataga 245
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 386 gtggatgtgattgagtatgacccttgacatgttgctctgaccactgtatatgcgcataga 445
Query: 246 tctgtgcaacatgtgtgcccgcacatcccccccccattc--acacacacttaattctgaa 303
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 446 tctgtgcaacatgtgtgcccgcacatccccccccc---cccacacacacttaattctgaa 502
Query: 304 tactgaatgataaggaaaaaatacagaaacctgataaatatctaactggtaaaatcaatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tactgaatgataaggaaaaaatacagaaacctgataaatatctaactggtaaaatcaatt 562
Query: 364 tgtaaaaattcaatgacaccaaagcaatatccacatatagatggtcaccctcttcagcat 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 563 tgtaaaaattcaatgacaccaaagcaatatccacatatggatggtcaccctcttcagcat 622
Query: 424 aaatccaaatttttctttgaaacgctttaccttctgtgagttcactaatcaatggttgat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaatccaaatttttctttgaaacgctttaccttctgtgagttcactaatcaatggttgat 682
Query: 484 taagatttcgaccaaaaccttggctac 510
|||||||||||||||||||||||||||
Sbjct: 683 taagatttcgaccaaaaccttggctac 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_d06.g1 MSMg01no386_d06.g1 CHROMAT_FILE:
MSMg01no386_d06.g1 PHD_FILE: MSMg01no386_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:58 2005
(195 letters)
>mm_chr2_43626650_43627245
Length = 596
Score = 356 bits (184), Expect = e-103
Identities = 193/196 (98%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 1 tggtcacccccacccacaaaagcaaggtcccttccacccccaaatttagcaagcctctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tggtcacccccacccacaaaagcaaggtcccttccacccccaaatttagcaagcctctgt 337
Query: 61 gcagtcagaccctgttcctgtctctgc-tgtgcgggacagactgactctccaggtttgtt 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 336 gcagtcagaccctgttcctgtctctgcttgtgcgggacagactgactctccaggtttgtt 277
Query: 120 aagggttcatgtttactccacagacaagcattgttcttgagtgaaattcatttcaatccc 179
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aagggttcatgactactccacagacaagcattgttcttgagtgaaattcatttcaatccc 217
Query: 180 ctggaaagatcttatg 195
||||||||||||||||
Sbjct: 216 ctggaaagatcttatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 596
Length adjustment: 8
Effective length of query: 187
Effective length of database: 588
Effective search space: 109956
Effective search space used: 109956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
