Query= MSMg01no386_e17.b1 MSMg01no386_e17.b1 CHROMAT_FILE:
MSMg01no386_e17.b1 PHD_FILE: MSMg01no386_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:04 2005
(358 letters)
>mm_chr2_34141060_34141817
Length = 758
Score = 671 bits (347), Expect = 0.0
Identities = 355/358 (99%)
Strand = Plus / Plus
Query: 1 gatctatgtgaatttaaagccagcctgctctctacaatgagtttcaggccagctagggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatctatgtgaatttaaagccagcctgctctctacaatgagtttcaggccagctagggat 260
Query: 61 acacagaaaaccctgtctcgaaacaaacaataacaacaaaaaaggcaggagagaaatata 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 acacagaaaaccctgtctcgaaacaaacaataacaacaaaaaaggcgggagagaaatata 320
Query: 121 ttttagatttacttcaagagataggaaaacaaaaaaggcaaaggaggtgacaatgggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttagatttacttcaagagataggaaaacaaaaaaggcaaaggaggtgacaatgggaca 380
Query: 181 tgattggtcatgaaagtttagggatccaatgtcttatcttctgtggcatggctcaaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgattggtcatgaaagtttagggatccaatgtcttatcttctgtggcatggctcaaaagt 440
Query: 241 cacattagccaaaatttaacacagagaagaagaaagacagcgngtattactactgtgatt 300
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 441 cacattagccaaaatttaacacagagaagaagaaaaacagcgtgtattactactgtgatt 500
Query: 301 ttatatgcatgtatatacatacatgtatatgcatatgtatatgtgtatgtgtgtatct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatatgcatgtatatacatacatgtatatgcatatgtatatgtgtatgtgtgtatct 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_e17.g1 MSMg01no386_e17.g1 CHROMAT_FILE:
MSMg01no386_e17.g1 PHD_FILE: MSMg01no386_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:04 2005
(606 letters)
>mm_chr2_34295085_34296090
Length = 1006
Score = 696 bits (360), Expect = 0.0
Identities = 369/372 (99%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 1 attacaagggctaacctgtgctaaataaatagcaagacccagtctctaaataaataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 attacaagggctaacctgtgctaaataaatagcaagacccagtctctaaataaataaata 312
Query: 61 aactttagtttcaaatctaaagaaagcaaaatcaaataaaaactgaaagataatcagaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 311 aactttagtttcaaatctaaagaaagcaaaatcaaataaaaactgaaagataatcagata 252
Query: 121 aatattacaataggtatctgatattaaagaaagcttatatgtaacacaaagaaaattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatattacaataggtatctgatattaaagaaagcttatatgtaacacaaagaaaattaaa 192
Query: 181 tcaattattaattatattttaaaaagcaagttcttaggagcctgatacagcttgtctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 191 tcaattattaattatattttaaaaagcaagttcttaggagcctgatacagc-tgtctcct 133
Query: 241 gagggcctttgtcagtacctggcaaatacagaagtggatgctcacaatcatccattggac 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gagggcctttgtcagtgcctggcaaatacagaagtggatgctcacaatcatccattggac 73
Query: 301 agagcacagggtccccaatgaaagagctagagaaagtacccaaggagctgaaggggtctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agagcacagggtccccaatgaaagagctagagaaagtacccaaggagctgaaggggtctg 13
Query: 361 aagccccatagg 372
||||||||||||
Sbjct: 12 aagccccatagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
