Query= MSMg01no386_i06.b1 MSMg01no386_i06.b1 CHROMAT_FILE:
MSMg01no386_i06.b1 PHD_FILE: MSMg01no386_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:20 2005
(249 letters)
>mm_chr2_87842902_87843550
Length = 649
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%)
Strand = Plus / Minus
Query: 1 tttagtccctgttttaaagagtcacagaactaataagagatattaaaattttgacctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttagtccctgttttaaagagtcacagaactaataagagatattaaaattttgacctaaa 389
Query: 61 ttaaaattatattgttatttagcttttgtgttgtgaattgtaaaggttgagtgttattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttaaaattatattgttatttagcttttgtgttgtgaattgtaaaggttgagtgttattgg 329
Query: 121 aaggacagctagtgagtttctttcacaagaagactaccacaaaagtcattctctgtgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 328 aaggacagctagtgagtttctttcacaagaagactaccacaaaagtcattctctgtgtca 269
Query: 181 ctgtggccaaaccagacttacatatatttaaaagagaaagttccttgtcatctctttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctgtggccaaaccagacttacatatatttaaaagagaaagttccttgtcatctctttctt 209
Query: 241 tgggttag 248
||||||||
Sbjct: 208 tgggttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no386_i06.g1 MSMg01no386_i06.g1 CHROMAT_FILE:
MSMg01no386_i06.g1 PHD_FILE: MSMg01no386_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:21 2005
(569 letters)
>mm_chr2_87680812_87681780
Length = 969
Score = 284 bits (147), Expect = 9e-81
Identities = 204/223 (91%), Gaps = 4/223 (1%)
Strand = Plus / Plus
Query: 336 ataaaaattatttctctgaatttaaatgtaaactcaaatgtatgagtaatttcaaggctt 395
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 536 ataaaaattatttctctaaatttaaatgtgaactcaaatgtatgagtaatttcaagactt 595
Query: 396 acttaagtccaaagagttaaggt-gtgtcatcatagacaggctttcttaattttaaccct 454
||||||||||||||||||| ||| |||||||| |||| | |||||||||||||||||||
Sbjct: 596 acttaagtccaaagagtta-ggttgtgtcatcgtagatatactttcttaattttaaccct 654
Query: 455 tactaggaacactaaagttattcagctttgaactgattt-tcatgaggagattgaacctc 513
|||||||||||||||||||||||||||||||||||| || | |||| || | || |||||
Sbjct: 655 tactaggaacactaaagttattcagctttgaactgacttgt-atgatgaaagtgcacctc 713
Query: 514 actcagcatacccctacattttcatctatctcctaccagattt 556
| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 714 aatcagcaaacccctgcattttcatctatctcctaccagattt 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
