CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGGGGCTCATACGAGGTGCAGTGGTCGTGTGAGAGTTAGTTGAGTG
CAGAATCGATGCTCAGACTAGTGCAGCGTCAACAAGCCCACTGCCGGGAT
CTACTTCCAGCACACTTCCTCTGATGTGACCTAAGCATTATTCATTGGAC
CCCACAGCATTTCCCTCTCCACACTGCCATTCCTCAGAGAAGACACTGGC
CCGCCATCGCGGTCCCACCCCACCATAGCAATGCAAGCACTAAACACTGC
CCTTCCGGGTCAGCAGCAGGGGTCAGGCCTCCAGAGCCTGTACCCCTTGT
TCCTGTGTCGCCTCGAAAGTCACAGGGTGAGGGTGCTAGTGCTCTGTAGC
CTTTCTCTGCTGCTCCGGGGTTGCTCCCAGGCCTCAGACACCTCCTCAAG
GATCCAGGTGACAGCCTTGCGCCTACCTGCTTTCTGCGCTCCGTGATGGC
TGTCAGAGAACGCCTGCATTAATTAGATCTCCGATTAGATGGCACATTAA
GTAATTATCCCAGGGTAGATCCCAAGTGAAGTCTATTTAAAGTGGGTGCC
TGAACTCGTGAATGAAAACAGGGGTGAGTCACGCTCTGTTACACCACGCA
GAACCTGAAAGGCAGCGCAGCAGCAACAGGAGTAACTGCGGGCGGTTCTG
CCTCTCCCTTTCCTCGCTCAGCAACGCCCCAGCACTCTTG

CTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATACAGATAAAAAGACTCATCAGTACACTCAA
TGTGAGAAAGATTTCACATGTGCCAATTGTATTTGCAGGCATGAAAGAAG
TTGTATTGCAGTGCAACCCTCTGAATTTATTCAATGTGGTAAAGCCTTTG
CATATCATAGTCTTAGACAAAGGCATGAAAGAACACTTAATGGAGAGAAA
GACTATTACTGTAACCAATGTTGTAAAGCCTTTGTAATAAGCAGTCATCT
CCGAATACATAAACGAAGAAATACAGGAGAGAAACCCTATGAATGTAACC
AATGTTGTAAAACCTTTACTGTAAGGAGTGACCTCCAAATACATAAGCGA
ACACATACAGGAGAGAAACCCTTTGAATGCAACCAATGTGGTAAAGCCTT
TGCAGGAAGTGGTGACTTCCAAAAACATAAACGAAGACAAAGAGGAGAGA
AACCCTATGAATGTAACCAATGTGGTAAAACTTTTATAAGAAGTGGTCAC
CTCCAAATACATAAGCGAACACATACAGGAGAGAGACCCTATGAATGTAA
CCAATGTGGTAAAACTTTTATAAGAAGTGGTCACCTCTAANAACATAAGT
GAACACATACAGAAGAGAAACCCTTTGAATGTAACCAATGTGGTAAAGCT
TTTATAGAAATGANGACCTCCATATACNTAAGAGACACATATAGG

Query= MSMg01no386_o23.b1 MSMg01no386_o23.b1 CHROMAT_FILE:
MSMg01no386_o23.b1 PHD_FILE: MSMg01no386_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:51 2005
         (609 letters)



>mm_chr2_174726772_174727780
          Length = 1009

 Score = 1149 bits (594), Expect = 0.0
 Identities = 603/606 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctggggctcatacgaggtgcagtggtcgtgtgagagttagttgagtgcagaatc 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggggctcataggaggtgcagtggtcgtgtgagagttagttgagtgcagaatc 263

                                                                       
Query: 64  gatgctcagactagtgcagcgtcaacaagcccactgccgggatctacttccagcacactt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatgctcagactagtgcagcgtcaacaagcccactgccgggatctacttccagcacactt 323

                                                                       
Query: 124 cctctgatgtgacctaagcattattcattggaccccacagcatttccctctccacactgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctctgatgtgacctaagcattattcattggaccccacagcatttccctctccacactgc 383

                                                                       
Query: 184 cattcctcagagaagacactggcccgccatcgcggtcccaccccaccatagcaatgcaag 243
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cattcctcagagaaggcactggcccgccatcgcggtcccaccccaccatagcaatgcaag 443

                                                                       
Query: 244 cactaaacactgcccttccgggtcagcagcaggggtcaggcctccagagcctgtacccct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cactaaacactgcccttccgggtcagcagcaggggtcaggcctccagagcctgtacccct 503

                                                                       
Query: 304 tgttcctgtgtcgcctcgaaagtcacagggtgagggtgctagtgctctgtagcctttctc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgttcctgtgtcgcctcgaaagtcacagggtgagggtgctagtgctctgtagcctttctc 563

                                                                       
Query: 364 tgctgctccggggttgctcccaggcctcagacacctcctcaaggatccaggtgacagcct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgctgctccggggttgctcccaggcctcagacacctcctcaaggatccaggtgacagcct 623

                                                                       
Query: 424 tgcgcctacctgctttctgcgctccgtgatggctgtcagagaacgcctgcattaattaga 483
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 624 tgcgcctacctgctttctgcgctccgtgatggctgtcagagaacgcctgcgttaattaga 683

                                                                       
Query: 484 tctccgattagatggcacattaagtaattatcccagggtagatcccaagtgaagtctatt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tctccgattagatggcacattaagtaattatcccagggtagatcccaagtgaagtctatt 743

                                                                       
Query: 544 taaagtgggtgcctgaactcgtgaatgaaaacaggggtgagtcacgctctgttacaccac 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taaagtgggtgcctgaactcgtgaatgaaaacaggggtgagtcacgctctgttacaccac 803

                 
Query: 604 gcagaa 609
           ||||||
Sbjct: 804 gcagaa 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)