Query= MSMg01no387_g07.b1 MSMg01no387_g07.b1 CHROMAT_FILE:
MSMg01no387_g07.b1 PHD_FILE: MSMg01no387_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:26 2005
(388 letters)
>mm_chr2_87813840_87814627
Length = 788
Score = 719 bits (372), Expect = 0.0
Identities = 384/388 (98%)
Strand = Plus / Plus
Query: 1 aaaaaaggaataaaatggtaccatggaagatagtgatggctgccagatgggatgcacagg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aaaaaaggaataaaatggtaccatggaagatagtgatggctgccaggtgggatgcacagg 260
Query: 61 tggagaaagccttacgacgcccactggctgaacgcatcttaagaacagtgacaacaatga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tggagaaagccttacgacgcccactggctgaacgcatcttaaggacagtgacaacaatga 320
Query: 121 acaggtaagacaacagaataaggagtaatgtgctgacagcattaaatgtggcaaagacaa 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggtaagacagcagaataaggagtaatgtgctgacagcattaaatgtggcaaagacaa 380
Query: 181 acagcagtaattgactgatgagagtatcagaggaagaaagggctagtagtgaagagagtt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 acagcagtaattgactgatgagagtatcagaggaagaaagggctagcagtgaagagagtt 440
Query: 241 cacagaagaagtgatcgatcctattgacaccatgaaaagataattgcacagtagaacacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagaagaagtgatcgatcctattgacaccatgaaaagataattgcacagtagaacacg 500
Query: 301 tcagtgtcaaggaacatgtgaacccccatgcgtaggatcccaccaccagtgtgatacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtgtcaaggaacatgtgaacccccatgcgtaggatcccaccaccagtgtgatacaga 560
Query: 361 gtttctgggacatggctactgtgtagag 388
||||||||||||||||||||||||||||
Sbjct: 561 gtttctgggacatggctactgtgtagag 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_g07.g1 MSMg01no387_g07.g1 CHROMAT_FILE:
MSMg01no387_g07.g1 PHD_FILE: MSMg01no387_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:26 2005
(451 letters)
>mm_chr2_88098308_88099159
Length = 852
Score = 750 bits (388), Expect = 0.0
Identities = 436/452 (96%), Gaps = 1/452 (0%)
Strand = Plus / Minus
Query: 1 ctcagggtttatgtctcaagtgtcaagcagttacagatgaaacaataaacaatatcatga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 652 ctcagggtttatgtctcaagtgtcaagcagttacagattaaacaataaacaatatcatga 593
Query: 61 aataaattttcaggtttcagtcttctgcatgactcctaattgttcttcagaaatattttc 120
|||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||
Sbjct: 592 aataaatttttaggtttcagtcttctgcatgactcttagttgttcttcagaaatagtttc 533
Query: 121 cagttgctaaaatattagtatttgtatattcagttgaattctatttcactgattaattgc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cagttgctaaaatattagtacttgtatattcagttgaattctatttcactgattaattgc 473
Query: 181 tattgtagctgggaaaattataaaaacattttaattttgacgtaaagtatacatgtggtt 240
|||||||| |||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 472 tattgtagttgggaaaattataaaagcattttaattttgatgtaaactatacatgtggtt 413
Query: 241 tattaattgtattaacattatcaaaaatggatatcaggaaagactctattttggtgagtt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tattaattatattaacattatcaaaaatggatatcaggaaagactctattttggtgagtt 353
Query: 301 actttaaagttgtctctgttttcagtctgtggatgtacacaggatccacatactagagag 360
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actttaaatttgtctatgttttcagtctgtggatgtacacaggatccacatactagagat 293
Query: 361 aagggtaaaacagtgtgagctattttatttaatgatgcatatttgagtattaaacttgaa 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 292 aagggtaaaacagtgtgagctattttatttaatgatgcatatttgattattaaacttgaa 233
Query: 421 gcatattttt-catttccactgtactaaattt 451
|||||||||| |||||||||||||||||||||
Sbjct: 232 gcatattttttcatttccactgtactaaattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
