Query= MSMg01no388_c10.b1 MSMg01no388_c10.b1 CHROMAT_FILE:
MSMg01no388_c10.b1 PHD_FILE: MSMg01no388_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:25 2005
(593 letters)
>mm_chr2_171299821_171300813
Length = 993
Score = 1102 bits (570), Expect = 0.0
Identities = 585/590 (99%), Gaps = 2/590 (0%)
Strand = Plus / Plus
Query: 5 ggaattcactct-gaaatcagatgtgcgcagtcaaccttctgcctcagcataaagtggag 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcactctggacatcagatgtgcgcagtcaaccttctgcctcagcataaagtggag 264
Query: 64 gcagggtggtccaacattccaagcccttctcaactgtacttgcaagtaaagtccattccc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 gcagggtggtccaacattccaagcccttctcaactgtacttgcaagtaaagtccgttccc 324
Query: 124 ttcttaaattaaaaaagccaaatccacatactaagaatatccttgttggtgtgaagggaa 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttaaatt-aaaaagccaaatccacatactaagaatatccttgttggtgtgaagggaa 383
Query: 184 cagtttcacattttacaaaatgacgcaactcagacaggcgttgcttggtgcctgatacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagtttcacattttacaaaatgacgcaactcagacaggcgttgcttggtgcctgatacct 443
Query: 244 gcaggcttcggcacctctccaagttcaaaaccagctgctacatcccatatttaaactcat 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 gcaggcttcggcacctctccaagttcaaaaccagctgctacctcccatatttaaactcat 503
Query: 304 acagacacctccactaatgagggtcatacttattcttttgattctttacaaggtataata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acagacacctccactaatgagggtcatacttattcttttgattctttacaaggtataata 563
Query: 364 tgtgtggaaagcaagagattaacatagaagcaaaaagccagggtggcctgccatgtgcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgtggaaagcaagagattaacatagaagcaaaaagccagggtggcctgccatgtgcag 623
Query: 424 acgcaagctgaaaattaaacacattgccagttcactctgaagttaagaagcagaggaggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acgcaagctgaaaattaaacacattgccagttcactctgaagttaagaagcagaggaggg 683
Query: 484 ggaaccaggaccctggcccccattgatctgtcacttaaaaataaatcactccaacaattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggaaccaggaccctggcccccattgatctgtcacttaaaaataaatcactccaacaattt 743
Query: 544 acagttcccatcacttgctcactgtgctaccttagactccatgccctgcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acagttcccatcacttgctcactgtgctaccttagactccatgccctgcc 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_c10.g1 MSMg01no388_c10.g1 CHROMAT_FILE:
MSMg01no388_c10.g1 PHD_FILE: MSMg01no388_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:25 2005
(474 letters)
>mm_chr2_171521430_171522303
Length = 874
Score = 895 bits (463), Expect = 0.0
Identities = 472/475 (99%), Gaps = 2/475 (0%)
Strand = Plus / Minus
Query: 1 tttccacattacgatgcgctggggatgaccctcatgaatttcattctgtgacctttcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttccacattacgatgcgctggggatgaccctcatgaatttcattctgtgacctttcaca 615
Query: 61 gctgtcgggtctcaataatttttacctgttttgatattttccaaaattgctgaggacgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gctgtcgggtctcaataatttttacctgttttgatattttccaaaattgctgaggacgtt 555
Query: 121 gtgacatgaagaactggcaaatctgcttaggcctcccatggtgagcagcgggcatgaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtgacatgaagaactggcaaatctgcttaggcctcccatggtgagcagcgggcatgaggg 495
Query: 181 tcaagtggtgtgagagggaggtggagtcctgtgacacttgagggtcggcagtctcaggat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcaagtggtgtgagagggaggtggagtcctgtgacacttgagggtcggcagtctcaggag 435
Query: 241 gtgatgtcaacgctgaaattaagcaacgttgtgatttgcattgattcatttttaatcgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtgatgtcaacgctgaaattaagcaacgttgtgatttgcattgattcatttttaatcgta 375
Query: 301 gtgaccagccacctcaacagttcctaattccttcaaagatcatcatatttttttctctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtgaccagccacctcaacagttcctaattccttcaaagatcatcatatttttttctctgt 315
Query: 361 ttgccaaagagggggcat-gggtctacatcattgagaacctgtctgtttcccagctctct 419
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgccaaagagggggcatcggg-ctacatcattgagaacctgtctgtttcccagctctct 256
Query: 420 ttctgacactaggcctgtgtcaaccttttaaatgttggagcagaagaggaaaaac 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttctgacactaggcctgtgtcaaccttttaaatgttggagcagaagaggaaaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
