Query= MSMg01no389_b07.b1 MSMg01no389_b07.b1 CHROMAT_FILE:
MSMg01no389_b07.b1 PHD_FILE: MSMg01no389_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:34 2005
(347 letters)
>mm_chr2_3661993_3662739
Length = 747
Score = 617 bits (319), Expect = 0.0
Identities = 340/347 (97%)
Strand = Plus / Plus
Query: 1 tgcatagctcagggatttcagggatatgagaggatgctgcagatcaagggaggaaagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcatagctcagggatttcagggatatgagaggatgctgcagatcaagggaggaaagctt 260
Query: 61 tgggaactgggaggggactcaagcggagggagcttaaatgtgaactttgcccttttggaa 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaactgggaggggactcaagtggagggagcttaaatgtgaactttgcccttttggaa 320
Query: 121 ttccaagcttcttgactttgggtaggttgctaatctcctgagttctgctactcctcctac 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ttccaagcttcttgactttgggtaggttgctaatctcctgatttctgctactcctcctac 380
Query: 181 tcctccatcagtaaggacacacatacttgctgcatagaactccgagggatttttagagac 240
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tcctccatcagtaaggacacaaatacttgctgcatagaactcccagggatttttagagat 440
Query: 241 gagatccaagtgttgctaacaatgcctacaatgctgtaagcactcaaaagttccctggta 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagatccaagtgttgcaaacaatgcctacaatgctgtaagcactcaaaagttccctggta 500
Query: 301 atagagtagtgcttcagcgagccacttgtacaccaagccatgtcact 347
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 atagagtagtgcttcagcgagccacttgtagaccaagccatgtcact 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_b07.g1 MSMg01no389_b07.g1 CHROMAT_FILE:
MSMg01no389_b07.g1 PHD_FILE: MSMg01no389_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:34 2005
(376 letters)
>mm_chr2_3823537_3824307
Length = 771
Score = 638 bits (330), Expect = 0.0
Identities = 363/376 (96%), Gaps = 5/376 (1%)
Strand = Plus / Minus
Query: 1 catctcattccacagtttaccctttcaagtattgggctgtgctctcaagaaccaaatgaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 571 catctcattccacagtttaccctttcaagtattgggctctgctctcaagaaccaaattaa 512
Query: 61 gtagcagagtctaaagggtggagggggtgttctgagtctcattctttggctccaatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtagcagagtctaaagggtggagggggtgttctgagtctcattctttggctccaatatct 452
Query: 121 tccatccttctccagtcttggaaccacattgtacttttgtaaaaataaaaaaatatatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tccatccttctccagtcttggaaccacattgtacttttgtaaaaataaaaaaatatatga 392
Query: 181 ttatcactagactttaagtacacgtagaatcagagctactatggacttaacaaacaaaca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttatcactagactttaagtacacatagaatcagagctactatggacttaacaaacaaaca 332
Query: 241 agcatatttttaacagcatggcaatagtcgcactgtttttagtctctttgtggagagact 300
| || | |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 331 aacaaaa----aacagcatggcaatagtcgcactgtttttagtctctttgtagagagact 276
Query: 301 ttacattttgagtttctctgccttggatagcggtggggggagttaccaatctagatgcta 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 275 ttacattttgagtttctctgccttggatagcggtggggg-agttaccaatctagatgcta 217
Query: 361 acgcctcttgaccgca 376
| ||||||||||||||
Sbjct: 216 atgcctcttgaccgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 771
Length adjustment: 9
Effective length of query: 367
Effective length of database: 762
Effective search space: 279654
Effective search space used: 279654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
