CCCGTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTAGCTCTGTACTCCATTTTTAATGGGGTTATTTG
ATTTTCTGGAGTCTACCTTCTTGAGTTCTTTATATATATTGAATATTAGT
CCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
ACTTTTTGTCTCATTGTTGGTATCTTTTGCCTTACAGAAGCTTTGCAACT
TTATGAGGTCCCATTTGTCGATTCTCGATCTTATAGCACCAGCCATTGCC
GCTCTGTTCAGGAATTCTTCCCCTGTGCCCATATCTTCGAGGTTTTCCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTAGTTTCACT
ATTTTATCTTTTCATACTTTTGATCCCTCCAACCTTCCTTATAAATAGAC
CTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCACACACACACATCTATGACTTTTTTCCTTTAATTGTTGTTATACAC
ACACACACACACACACACACATCTGTATCTGTATCTGCATCTGTATCTGT
ACCTGTACCTGTACCTGTATCTGTACCTGCACCTGTACCTGCACCTGTAC
CCGTACCTGCACCTGTACCTGGACCTGTACCTGTATCCGCCCTCTGTATC
TGCACCCGTACCTGCACCCGTATCCGCATCCGCCTCCGTCCCTGTACCCG
T

NNNNAAACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTCTAGGACTCTAAA
ATGATGGGCAAGGTTGCTGAATCTTACTGAGAGCTGAGCAAACACAATGG
AGTCTGGGCTTTGATGGGCCAGGAAGATGTGTGGTAGGCTGGGGTAGTAT
GGATAACAGGTAGACTCTAGCAGGGACTTTCTCCTTAGAGTACTATGCCT
GGGTTACATGGTGGGCTCGCAATCACTTCTGCCTGTGAGAAGATCTTTTC
CTAGCAGTAAAGGGTATGAGACAGAGGAAGTGTCCAAATCCATTCACCCT
TTCCTTCTACCCTGTGGATTTACTTTATATTCCTTTACCAAGGGGGCACT
TCCCAAATCAATTCTTATATCTATAACCATCTGTAGTCTCTCTGAATATT
GAATTCTAAATATGACAAAGAAATAGATTTGGGATAGCAGAATCCCTTCA
CCCTTAGTCTCCCATGACCATGTCCCATCAGCAGACACTGGGTTTCTTAT
ACTTTCTTATAACTCTTTTCTGGAACCCGTATTACCTCATTTGAACCAGG
AGTTCAATACTGGATTCATGGCTAATAAACAACAGACACCTTTGGCAGAT
AGGACACAGTCCAACCAGGACCTGGCAATCAGAGCTGCAGCTGGCAGTGT
GAGTGCCATGCTAGCTGACAGGGACCTATGAAGAGTCA

Query= MSMg01no389_d01.g1 MSMg01no389_d01.g1 CHROMAT_FILE:
MSMg01no389_d01.g1 PHD_FILE: MSMg01no389_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:42 2005
         (562 letters)



>mm_chr2_138590216_138591177
          Length = 962

 Score = 1079 bits (558), Expect = 0.0
 Identities = 561/562 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtctaggactctaaaatgatgggcaaggttgctgaatcttactgagagctgagcaaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctaggactctaaaatgatgggcaaggttgctgaatcttactgagagctgagcaaaca 260

                                                                       
Query: 61  caatggagtctgggctttgatgggccaggaagatgtgtggtaggctggggtagtatggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatggagtctgggctttgatgggccaggaagatgtgtggtaggctggggtagtatggat 320

                                                                       
Query: 121 aacaggtagactctagcagggactttctccttagagtactatgcctgggttacatggtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaggtagactctagcagggactttctccttagagtactatgcctgggttacatggtgg 380

                                                                       
Query: 181 gctcgcaatcacttctgcctgtgagaagatcttttcctagcagtaaagggtatgagacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcgcaatcacttctgcctgtgagaagatcttttcctagcagtaaagggtatgagacag 440

                                                                       
Query: 241 aggaagtgtccaaatccattcaccctttccttctaccctgtggatttactttatattcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaagtgtccaaatccattcaccctttccttctaccctgtggatttactttatattcct 500

                                                                       
Query: 301 ttaccaagggggcacttcccaaatcaattcttatatctataaccatctgtagtctctctg 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ttaccaagggggcacttcccaaatcaattcttatatctataagcatctgtagtctctctg 560

                                                                       
Query: 361 aatattgaattctaaatatgacaaagaaatagatttgggatagcagaatcccttcaccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatattgaattctaaatatgacaaagaaatagatttgggatagcagaatcccttcaccct 620

                                                                       
Query: 421 tagtctcccatgaccatgtcccatcagcagacactgggtttcttatactttcttataact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagtctcccatgaccatgtcccatcagcagacactgggtttcttatactttcttataact 680

                                                                       
Query: 481 cttttctggaacccgtattacctcatttgaaccaggagttcaatactggattcatggcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttttctggaacccgtattacctcatttgaaccaggagttcaatactggattcatggcta 740

                                 
Query: 541 ataaacaacagacacctttggc 562
           ||||||||||||||||||||||
Sbjct: 741 ataaacaacagacacctttggc 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space:   525504
Effective search space used:   525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)