Query= MSMg01no389_i01.b1 MSMg01no389_i01.b1 CHROMAT_FILE:
MSMg01no389_i01.b1 PHD_FILE: MSMg01no389_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:07 2005
(451 letters)
>mm_chr2_19823535_19824385
Length = 851
Score = 661 bits (342), Expect = 0.0
Identities = 371/382 (97%), Gaps = 3/382 (0%)
Strand = Plus / Minus
Query: 67 accaatctaagctgtacctagtggaaactaccaatggctagagttaccagccagttgcac 126
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 851 accaatccaagctgtacctagtggaaaccaccaatggctagagttaccagccagttgaac 792
Query: 127 ttttcttgtctggttctacatcaaaaatttagagcttgattttttttttgggctgggttt 186
||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||
Sbjct: 791 ttttcttgtctggttctacatcaaaaatttagagcttga---tttttttagactggattt 735
Query: 187 tactatgtaatcactaatttcaacccctgagtgtgactacctccatgttccaagtgctgg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tactatgtaatcactaatttcaacccctgagtgtgactacctccatgttccaagtgctgg 675
Query: 247 gatgacaggcatggaccatcacagccatcctagccttgaccttgctggaacagtagcctg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gatgacaggcatggaccatcacagccatcctagccttgaccttgctggaacagtagcctg 615
Query: 307 tctctcagtgacccgtcttcccaactcagagaaaagaacaaagatatcactaaaactggt 366
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 614 tctctcagtgacccgtcttcccaactcagagaaaagaacaaagacatcactaaaactggt 555
Query: 367 gaaagaatacattctgctttgcattgagcaaggctgctggtctctccctgcaatgaattg 426
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaatgaatacattctgctttgcattgagcaaggctgctggtctctccctgcaatgaattg 495
Query: 427 ctaggttgggtataagtttgtg 448
||||||||||||||||||||||
Sbjct: 494 ctaggttgggtataagtttgtg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_i01.g1 MSMg01no389_i01.g1 CHROMAT_FILE:
MSMg01no389_i01.g1 PHD_FILE: MSMg01no389_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:08 2005
(528 letters)
>mm_chr2_19693087_19694014
Length = 928
Score = 977 bits (505), Expect = 0.0
Identities = 522/528 (98%)
Strand = Plus / Plus
Query: 1 aattcccaaccctcacatggtggctcataaccgcttgatactctagttccaagagatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcccaaccctcacatggtggctcataaccgcttgatactctagttccaagagatcca 260
Query: 61 acatcctcttctagcctctgagggatgctgtacatatatggtacatataatctcattcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatcctcttctagcctctgagggatgctgtacatatatggtacatataatctcattcaa 320
Query: 121 acacatacctaggtaagcaattaacaaaacaaaacaagtttaagaggttatggtggtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacatacctaggtaagcaattaacaaaacaaaacaagtttaagaggttatggtggtttg 380
Query: 181 agtgagaaatgtcttccataggctcaggaatttgaacaattgattagcagttattggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgagaaatgtcttccataggctcaggaatttgaacaattgattagcagttattggtgc 440
Query: 241 tgtttggagaagttatgagatgagtatgtcattggggataggctttgacagtttaaagtc 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tgtttggagaagttatgagatgagtatgtcattggggataggctttgatagtttaaagtc 500
Query: 301 ttgtgccacttttagtttaccttttctgcactgtgcttgtggtggagttccttcaacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtgccacttttagtttaccttttctgcactgtgcttgtggtggagttccttcaacttc 560
Query: 361 ctgctgccatccctgcagcttgctgatatgtctctccaccatgatggactctcttatccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctgccatccctgcagcttgctgatatgtctctccaccatgatggactctcttatccc 620
Query: 421 tctgcatctgtaagccaaataaatggctgcttttgtacattgcctttggtcatggtgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgcatctgtaagccaaataaatggctgcttttgtacattgcctttggtcatggtgcct 680
Query: 481 tgacttancaatggaaaatagtaactgacaaataccagtgattatgtc 528
||||||| |||||||| |||||||||||||||||| ||||||| ||||
Sbjct: 681 tgacttagcaatggaagatagtaactgacaaatacaagtgattgtgtc 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
