Query= MSMg01no390_g15.b1 MSMg01no390_g15.b1 CHROMAT_FILE:
MSMg01no390_g15.b1 PHD_FILE: MSMg01no390_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:19 2005
(101 letters)
>mm_chr2_64702116_64702616
Length = 501
Score = 188 bits (97), Expect = 1e-52
Identities = 100/101 (99%)
Strand = Plus / Minus
Query: 1 ggacaagctggctagatagactaactagaactagttaaatctgcgtgcagtgagagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacaagctggctagatagactaactagaactagttaaatctgcgtgcagtgagagaaag 242
Query: 61 gaagttgatgaaagactgaggaagacacttgatgctaacct 101
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaattgatgaaagactgaggaagacacttgatgctaacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 501
Length adjustment: 8
Effective length of query: 93
Effective length of database: 493
Effective search space: 45849
Effective search space used: 45849
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no390_g15.g1 MSMg01no390_g15.g1 CHROMAT_FILE:
MSMg01no390_g15.g1 PHD_FILE: MSMg01no390_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:19 2005
(560 letters)
>mm_chr2_64579952_64580911
Length = 960
Score = 1017 bits (526), Expect = 0.0
Identities = 550/558 (98%), Gaps = 2/558 (0%)
Strand = Plus / Plus
Query: 1 agttaagccagccatttctgccaatggaactgttgtctagataggagaagattcatggaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 201 agttaagccagccttttctgccaatggaactgttgtctagataggagaagagtcatggga 260
Query: 61 ctttatcctttccagttcatccataatacacctcaatgtttctagtggcttttgccagcc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttctcctttccagttcatccataatacacctcaatgtttctagtggcttttgccagcc 320
Query: 121 ttatgttctttgtttatgtattt-cattgaatgtccctacaaggacaattaaaacatttt 179
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatgttctttgtttatgtatttgc-ttgaatgtccctacaaggacaattaaaacatttt 379
Query: 180 caaataaaaacaggctaatatcattcttcgcactcttcacttatctttttcttgtttttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaataaaaacaggctaatatcattcttcgcactcttcacttatctttttcttgtttttt 439
Query: 240 tgcactattgtatatcagtaattaaagaagaggttatacatttgaaagggaattaggagg 299
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgcactagtgcatatcagtaattaaagaagaggttatacatttgaaagggaattaggagg 499
Query: 300 tcatgataggaattgcaagaggatagaaaagtaggaattatataacttcaatattgatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcatgataggaattgcaagaggatagaaaagtaggaattatataacttcaatattgatgt 559
Query: 360 acaaaactctcaaaatacaattaattttattgaagaatggaaaaaaagtcttaatcaagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acaaaactctcaaaatacaattaattttattgaagaatggaaaaaaagtcttaatcaagg 619
Query: 420 gggctatttttgcacaaaacaaagccccaagctaagtcttgttaatccaataatctaata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggctatttttgcacaaaacaaagccccaagctaagtcttgttaatccaataatctaata 679
Query: 480 agttggacaatgtcttggaaaataaagacttccagtccaatgttgaatgggagtaataat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttggacaatgtcttggaaaataaagacttccagtccaatgttgaatgggagtaataat 739
Query: 540 agaagctttcttgtttca 557
||||||||||||||||||
Sbjct: 740 agaagctttcttgtttca 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
