Query= MSMg01no390_i05.b1 MSMg01no390_i05.b1 CHROMAT_FILE:
MSMg01no390_i05.b1 PHD_FILE: MSMg01no390_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:27 2005
(141 letters)
>mm_chr2_33232001_33232543
Length = 543
Score = 226 bits (117), Expect = 3e-64
Identities = 136/143 (95%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 1 atgttcctgatctgtcagacaattcatcacattaggtagaaccatttgatgctttaaaaa 60
||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 201 atgttcctgatctatcagacaattcatcaaaataggtagaaccatttgatgctttaaaaa 260
Query: 61 aaaa--ctggttgcccaaagtctacttgtgtgtatgtgctatgcatgcacatatttgtaa 118
|||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 261 aaaaaactggttgcccaaagtctacttgtgtgtatgtgctatgcatgcacacatgtgtaa 320
Query: 119 atgccagagattaataacaagca 141
|||||||||||||||||||||||
Sbjct: 321 atgccagagattaataacaagca 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 543
Length adjustment: 8
Effective length of query: 133
Effective length of database: 535
Effective search space: 71155
Effective search space used: 71155
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_i05.g1 MSMg01no390_i05.g1 CHROMAT_FILE:
MSMg01no390_i05.g1 PHD_FILE: MSMg01no390_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:27 2005
(385 letters)
>mm_chr2_33405464_33406248
Length = 785
Score = 683 bits (353), Expect = 0.0
Identities = 374/385 (97%), Gaps = 9/385 (2%)
Strand = Plus / Minus
Query: 1 tgatcctcctgtctttaaccccaaaatgaaaagactacagtgcgtacctccaggcccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgatcctcctgtctttaaccccaaaatgaaaagactacagtgcgtacctccaggcccagc 341
Query: 61 tctaatggtctacttatttttggtgctctgtaagctgattacaatgcatccagatgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctaatggtctacttatttttggtgctctgtaagctgattacaatgcatccagatgtgaa 281
Query: 121 ttcaaatctcttatgttgtgaaatgtttcatgagccagcagatttcacacccgtcactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttcaaatctcttatgttgtgaaatgtttcatgagccagcagatttcacacccgtcactct 221
Query: 181 gaccttttcctgatgggtcttgttggataaccgttcattctcttctcatcctgctacgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaccttttcctgatgggtcttgttggataaccgttcattctcttctcatcctgctacgtc 161
Query: 241 agccga----ctttttctcatccctccccttagctgtctgttttgtgttctgggtaattt 296
|||||| | || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agccgacaccc----tc-cgtccctccccttagctgtctgttttgtgttctgggtaattt 106
Query: 297 ttacatatctactttccagttctagattgtatcttcagctgtatacaatctattgaacct 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ttacatatctactttccagttctagattgtatcttcagctgtatacaatctattgaacct 46
Query: 357 atctgattagattctgtgcgtatgt 381
|||||||||||||||||| ||||||
Sbjct: 45 atctgattagattctgtgtgtatgt 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
