Query= MSMg01no390_j21.b1 MSMg01no390_j21.b1 CHROMAT_FILE:
MSMg01no390_j21.b1 PHD_FILE: MSMg01no390_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:35 2005
(440 letters)
>mm_chr2_43193877_43194716
Length = 840
Score = 764 bits (395), Expect = 0.0
Identities = 422/441 (95%), Gaps = 18/441 (4%)
Strand = Plus / Minus
Query: 1 tgttttctgtaacctcatgggtaagctggttatagttctcttgagatgattgatttaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgttttctgtaacctcatgggtaagctggttatagttctcttgagatgattgatttaagc 500
Query: 61 ttgacaaaggagaagaagtgataacatcatttgatttgaattttaaatttcatcacttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgacaaaggagaagaagtgataacatcatttgatttgaattttaaatttcatcacttgc 440
Query: 121 tttaaatttatagaaaactagctagttttgaatccctttttagggtagtatattctgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttaaatttatagaaaactagctagttttgaatccctttttagggtagtatattctgctc 380
Query: 181 ttgtatggcattgatgtgaccttttgttcaagggtaaatgtcgtcacctctttctctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttgtatggcattgatgtgaccttttgttcaagggtaaatgtcgtcacctctttctctcag 320
Query: 241 tatcactaatgtttgaaggttaatattaaagtgctaacaggagacactagttttttctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tatcactaatgtttgaaggttaatattaaagtgctaacaggagacactagttttttctta 260
Query: 301 tct-tataatatgacactgtcttattcaaagtataagctctgtccatggatgaataaaac 359
||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 259 tctct-taatatgacactgtcttattcaaaatataagctctgtccatggatgaataaaac 201
Query: 360 acagacagacagacagacagacagacagacagacagacagatagacacatagccaggcaa 419
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 200 acagacagacagacagacagacagacagaca----------------catagccaggcaa 157
Query: 420 acaggcatgcatgtatgtgtg 440
|||||||||||||||||||||
Sbjct: 156 acaggcatgcatgtatgtgtg 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_j21.g1 MSMg01no390_j21.g1 CHROMAT_FILE:
MSMg01no390_j21.g1 PHD_FILE: MSMg01no390_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:35 2005
(472 letters)
>mm_chr2_43044711_43045583
Length = 873
Score = 861 bits (445), Expect = 0.0
Identities = 466/473 (98%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 1 agacactggacttgtgttgatatagaaaagaaattcactagcaaactggacctaggtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacactggacttgtgttgatatagaaaagaaattcactagcaaactggacctaggtatc 260
Query: 61 atgaatgctcagtggttccaagtattgaataactgacatctagatttaatggttagcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaatgctcagtggttccaagtattgaataactgacatctagatttaatggttagcatt 320
Query: 121 tgctcagctcattgtgcaaaaagaatcaacgggtagagactctggcaaggttgtgaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctcagctcattgtgcaaaaagaatcaacgggtagagactctggcaaggttgtgaaggg 380
Query: 181 tcagatgaatccactaagagtagctcacgtagg-aaaaacagaacagggagaaaaatcca 239
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 381 tcagatgaatccactaagagtagctcacgtaggaaaaaacagaacagggagcaaaatcca 440
Query: 240 cttctgagtggaacactagctcattccctgtgtgtaagagctcaacttcatcttgaggcc 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgagtggaacagtagctcattccctgtgtgtaagagctcaacttcatcttgaggcc 500
Query: 300 agggagcaaagctaagctgactatccaccttgaaataaagttcctaacctaatgactaac 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 agggagcaaagctaagctgactatccaccttgaaataaagttcctaacctaatggctaac 560
Query: 360 aatggaaaacattggtgtttgttctgtttaaatttggttcctgttagttagtttttttaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 561 aatggaaaacattggtgtttgttctgtttaaatttggttcctgttagttaatttttaaaa 620
Query: 420 aagcttaaggtttctttttcccctatgtaatatcattattagctaagtttccc 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagcttaaggtttctttttcccctatgtaatatcattattagctaagtttccc 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 873
Length adjustment: 10
Effective length of query: 462
Effective length of database: 863
Effective search space: 398706
Effective search space used: 398706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
